RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 USP34Q70CQ2 3546 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 CDK5RAP2Q96SN8 1893 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 BRWD1Q9NSI6 2320 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 CACNA1AO00555 2505 aa8.17□□□□□ -1.1
SDCBP-210ENST00000522843 MYOGP15173 224 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 CSF2RAP15509 400 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 GRIA4P48058 902 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 ZYXQ15942 572 aaKnown RBP8.16□□□□□ -1.1
SDCBP-210ENST00000522843 SPRED3Q2MJR0 410 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 CCDC184Q52MB2 194 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 MFSD5Q6N075 450 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 PI16Q6UXB8 463 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 KSR1Q8IVT5 923 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 TEX11Q8IYF3 940 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 SLC44A5Q8NCS7 719 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 ACER1Q8TDN7 264 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 TOX2Q96NM4 488 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 MOV10L1Q9BXT6 1211 aaKnown RBP8.16□□□□□ -1.1
SDCBP-210ENST00000522843 XPNPEP3Q9NQH7 507 aa8.16□□□□□ -1.1
SDCBP-210ENST00000522843 A0A0G2JMZ2 1700 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 PI4K2BG5E9Z4 385 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 CCER2I3L3R5 266 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 RFXAPO00287 272 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 CIAO1O76071 339 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 ECEL1O95672 775 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 CD8BP10966 210 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 VCAM1P19320 739 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 TIMM10P62072 90 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 KRT40Q6A162 431 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 CCSAPQ6IQ19 270 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-210ENST00000522843 DPP9Q86TI2 863 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 MAPKAPK5Q8IW41 473 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 NETO1Q8TDF5 533 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 VWCEQ96DN2 955 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 MAML3Q96JK9 1138 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 TRIM56Q9BRZ2 755 aaKnown RBP8.15□□□□□ -1.1
SDCBP-210ENST00000522843 PRKRIP1Q9H875 184 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-210ENST00000522843 RC3H2Q9HBD1 1191 aaKnown RBP8.15□□□□□ -1.1
SDCBP-210ENST00000522843 BRPF3Q9ULD4 1205 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 IVNS1ABPQ9Y6Y0 642 aa8.15□□□□□ -1.1
SDCBP-210ENST00000522843 ROBO3Q96MS0 1386 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 FLT1P17948 1338 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 A0A1W2PP55 124 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 MYADML2A6NDP7 307 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 EPOPA6NHQ4 379 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 SMIM22K7EJ46 135 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 MAP4K4O95819 1239 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-210ENST00000522843 GH2P01242 217 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 RNASE1P07998 156 aaKnown RBP8.14□□□□□ -1.11
SDCBP-210ENST00000522843 ERCC3P19447 782 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 CDK7P50613 346 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 RABGGTBP53611 331 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 NHLH1Q02575 133 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 PPIGQ13427 754 aaKnown RBP eCLIP8.14□□□□□ -1.11
SDCBP-210ENST00000522843 RAB30Q15771 203 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 SPTY2D1Q68D10 685 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-210ENST00000522843 ADGRA1Q86SQ6 560 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 PLD6Q8N2A8 252 aaKnown RBP8.14□□□□□ -1.11
SDCBP-210ENST00000522843 HERVK_113Q902F9 699 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 TCF12Q99081 682 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 LIN7BQ9HAP6 207 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 SLC28A3Q9HAS3 691 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 MBNL3Q9NUK0 354 aaKnown RBP8.14□□□□□ -1.11
SDCBP-210ENST00000522843 HMG20BQ9P0W2 317 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 MSRAQ9UJ68 235 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 VAV3Q9UKW4 847 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 PALD1Q9ULE6 856 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 PA2G4Q9UQ80 394 aaKnown RBP8.14□□□□□ -1.11
SDCBP-210ENST00000522843 MTCH2Q9Y6C9 303 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 FOCADQ5VW36 1801 aa8.14□□□□□ -1.11
SDCBP-210ENST00000522843 ZNFX1Q9P2E3 1918 aaKnown RBP8.13□□□□□ -1.11
SDCBP-210ENST00000522843 STRNO43815 780 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 ZNF865P0CJ78 1059 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-210ENST00000522843 RARBP10826 455 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 POU3F3P20264 500 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-210ENST00000522843 GUCY1A2P33402 732 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 ACLYP53396 1101 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 RNF180Q86T96 592 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 FOXP4Q8IVH2 680 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-210ENST00000522843 GALNT12Q8IXK2 581 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 KLHDC9Q8NEP7 349 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 PI4K2BQ8TCG2 481 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 ANKS1AQ92625 1134 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 SLC38A3Q99624 504 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 SPATC1LQ9H0A9 340 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 KIAA1683Q9H0B3 1180 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 DHX36Q9H2U1 1008 aaKnown RBP8.13□□□□□ -1.11
SDCBP-210ENST00000522843 RPAP3Q9H6T3 665 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-210ENST00000522843 STARD7Q9NQZ5 370 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 PPP1R9AQ9ULJ8 1098 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 ZNF318Q5VUA4 2279 aa8.13□□□□□ -1.11
SDCBP-210ENST00000522843 UMODL1Q5DID0 1318 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 ZNF521Q96K83 1311 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 SYNRGQ9UMZ2 1314 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 DCDC2CA8MYV0 355 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 PRR33A8MZF0 331 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 B3GALT4O96024 378 aa8.12□□□□□ -1.11
SDCBP-210ENST00000522843 CYP2C18P33260 490 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms