RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CHAMP1Q96JM3 812 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 C2orf40Q9H1Z8 148 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 SUDS3Q9H7L9 328 aaPredicted RBP17.47■□□□□ 0.39
USP42-207ENST00000521713 ELP3Q9H9T3 547 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 SLC12A6Q9UHW9 1150 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 PSMD14O00487 310 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 MYCP01106 439 aaPredicted RBP17.47■□□□□ 0.39
USP42-207ENST00000521713 GMPSP49915 693 aaPredicted RBP17.47■□□□□ 0.39
USP42-207ENST00000521713 IFT88Q13099 833 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 ANGEL2Q5VTE6 544 aaKnown RBP17.47■□□□□ 0.39
USP42-207ENST00000521713 UBN2Q6ZU65 1347 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
USP42-207ENST00000521713 IPO5O00410 1097 aaKnown RBP17.47■□□□□ 0.39
USP42-207ENST00000521713 TNPO2O14787 897 aaKnown RBP17.47■□□□□ 0.39
USP42-207ENST00000521713 OSTNP61366 133 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 PIGOQ8TEQ8 1089 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 BUB1O43683 1085 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 OPHN1O60890 802 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 IRX5P78411 483 aaPredicted RBP17.46■□□□□ 0.39
USP42-207ENST00000521713 BFSP1Q12934 665 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 SNAPC2Q13487 334 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 MTMR2Q13614 643 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 GGA3Q9NZ52 723 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 SEL1LQ9UBV2 794 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 SEC31AO94979 1220 aaKnown RBP17.46■□□□□ 0.39
USP42-207ENST00000521713 CDC27P30260 824 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 PSMC5P62195 406 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 ATP2A3Q93084 1043 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 MRRFQ96E11 262 aaKnown RBP17.46■□□□□ 0.39
USP42-207ENST00000521713 POTEMA6NI47 508 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 CLDN3O15551 220 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 BSPRYQ5W0U4 402 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 TADA2BQ86TJ2 420 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 GINM1Q9NU53 330 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 CHUKO15111 745 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 PFDN6O15212 129 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 KIF1CO43896 1103 aaKnown RBP17.46■□□□□ 0.39
USP42-207ENST00000521713 GYS1P13807 737 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 PHBP35232 272 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 ZNF543Q08ER8 600 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 C7orf31Q8N865 590 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 ZNF653Q96CK0 615 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 MTFR1LQ9H019 292 aa17.46■□□□□ 0.39
USP42-207ENST00000521713 FAF1Q9UNN5 650 aaPredicted RBP17.46■□□□□ 0.39
USP42-207ENST00000521713 STMN1P16949 149 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 MMP14P50281 582 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 ZBED6P86452 979 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 FBXO38Q6PIJ6 1188 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 DSTYKQ6XUX3 929 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 NME8Q8N427 588 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 ANKRD42Q8N9B4 389 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
USP42-207ENST00000521713 PPP1R9AQ9ULJ8 1098 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 PFDN1O60925 122 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 ELF1P32519 619 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 LMNB2Q03252 620 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 TAF1CQ15572 869 aaPredicted RBP17.45■□□□□ 0.38
USP42-207ENST00000521713 PARD6BQ9BYG5 372 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 NDST4Q9H3R1 872 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 VPS37BQ9H9H4 285 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 MYOZ2Q9NPC6 264 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 UBE2TQ9NPD8 197 aaPredicted RBP17.45■□□□□ 0.38
USP42-207ENST00000521713 LRRN2O75325 713 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 TBC1D8O95759 1140 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 NDUFB10O96000 172 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 NBPF9Q3BBW0 867 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 TACC3Q9Y6A5 838 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 LRRIQ1Q96JM4 1722 aa17.45■□□□□ 0.38
USP42-207ENST00000521713 ADCY8P40145 1251 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 DEFB132Q7Z7B7 95 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 THNSL1Q8IYQ7 743 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 PPP1R16BQ96T49 567 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 GPR75-ASB3A0A0A6YYF3 556 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 EIF3CLB5ME19 914 aaKnown RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 C16orf86Q6ZW13 317 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 PALM2Q8IXS6 379 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 PROM2Q8N271 834 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 DYDC2Q96IM9 177 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 EIF3CQ99613 913 aaKnown RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 TUBB6Q9BUF5 446 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 GABBR1Q9UBS5 961 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 HGSO14964 777 aaPredicted RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 COBLO75128 1261 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 MAN1A1P33908 653 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 RFX5P48382 616 aaPredicted RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 TGFB2P61812 414 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 SEMA3FQ13275 785 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 MESDQ14696 234 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 CEP55Q53EZ4 464 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 ZNF667Q5HYK9 610 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 C10orf76Q5T2E6 689 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 SLC35F6Q8N357 371 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 RAD54LQ92698 747 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 MTRQ99707 1265 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
USP42-207ENST00000521713 INTS9Q9NV88 658 aaKnown RBP17.44■□□□□ 0.38
USP42-207ENST00000521713 TPX2Q9ULW0 747 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms