RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 NPEPPSL1A6NEC2 478 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 SDHAP31040 664 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 KCNQ1P51787 676 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 GYS2P54840 703 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 CD83Q01151 205 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 TOP3AQ13472 1001 aaPredicted RBP6.95□□□□□ -1.3
PTPN12-214ENST00000520947 ARHGAP44Q17R89 818 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 OTOP2Q7RTS6 562 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 REXO1L1PQ8IX06 675 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 SYNPOQ8N3V7 929 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 BTBD2Q9BX70 525 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 CARD11Q9BXL7 1154 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 MAGEC2Q9UBF1 373 aaPredicted RBP6.95□□□□□ -1.3
PTPN12-214ENST00000520947 ASB1Q9Y576 335 aa6.95□□□□□ -1.3
PTPN12-214ENST00000520947 DVL2O14641 736 aa6.94□□□□□ -1.3
PTPN12-214ENST00000520947 KPNA6O60684 536 aa6.94□□□□□ -1.3
PTPN12-214ENST00000520947 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
PTPN12-214ENST00000520947 ZNF827Q17R98 1081 aa6.94□□□□□ -1.3
PTPN12-214ENST00000520947 CNNM4Q6P4Q7 775 aa6.94□□□□□ -1.3
PTPN12-214ENST00000520947 IFNL2Q8IZJ0 200 aa6.94□□□□□ -1.3
PTPN12-214ENST00000520947 OR10A5Q9H207 317 aa6.94□□□□□ -1.3
PTPN12-214ENST00000520947 ANKRD62A6NC57 917 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 GOLGA6L22H0YM25 854 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 H7C1D1 291 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 CBX4O00257 560 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 CUTAO60888 179 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 NEK4P51957 841 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 EPHB4P54760 987 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 EFEMP1Q12805 493 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 STILQ15468 1287 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 SPATS1Q496A3 300 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 DALRD3Q5D0E6 543 aaKnown RBP6.93□□□□□ -1.3
PTPN12-214ENST00000520947 CC2D1AQ6P1N0 951 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-214ENST00000520947 CXXC5Q7LFL8 322 aaKnown RBP6.93□□□□□ -1.3
PTPN12-214ENST00000520947 DHX37Q8IY37 1157 aaKnown RBP6.93□□□□□ -1.3
PTPN12-214ENST00000520947 SSBP3Q9BWW4 388 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-214ENST00000520947 PCIF1Q9H4Z3 704 aa6.93□□□□□ -1.3
PTPN12-214ENST00000520947 CNOT4O95628 575 aaKnown RBP6.92□□□□□ -1.3
PTPN12-214ENST00000520947 HMGCRP04035 888 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 ETV4P43268 484 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 MOGSQ13724 837 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 NOLC1Q14978 699 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTPN12-214ENST00000520947 ZNF568Q3ZCX4 644 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 KANK2Q63ZY3 851 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 CALML6Q8TD86 181 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
PTPN12-214ENST00000520947 C8orf49Q96NF6 230 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 LRRC37BQ96QE4 947 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 ZDHHC5Q9C0B5 715 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 SLKQ9H2G2 1235 aaPredicted RBP6.92□□□□□ -1.3
PTPN12-214ENST00000520947 SMPD4Q9NXE4 827 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 B4GALT6Q9UBX8 382 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 ST6GALNAC2Q9UJ37 374 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 CNOT11Q9UKZ1 510 aaKnown RBP6.92□□□□□ -1.3
PTPN12-214ENST00000520947 SLC4A7Q9Y6M7 1214 aa6.92□□□□□ -1.3
PTPN12-214ENST00000520947 GPR42O15529 346 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 SLC9A1P19634 815 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 ZNF174Q15697 407 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 SLFN13Q68D06 897 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 LARP4Q71RC2 724 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPN12-214ENST00000520947 RTN4RL1Q86UN2 441 aaPredicted RBP6.91□□□□□ -1.3
PTPN12-214ENST00000520947 CIR1Q86X95 450 aaPredicted RBP6.91□□□□□ -1.3
PTPN12-214ENST00000520947 NIM1KQ8IY84 436 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 NINJ1Q92982 152 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 GNRHR2Q96P88 292 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 KIAA1683Q9H0B3 1180 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 MEGF9Q9H1U4 602 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 INTS7Q9NVH2 962 aaKnown RBP6.91□□□□□ -1.3
PTPN12-214ENST00000520947 FBXO10Q9UK96 956 aa6.91□□□□□ -1.3
PTPN12-214ENST00000520947 A0A0G2JNJ9 132 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 ADRB1P08588 477 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 PTX3P26022 381 aaPredicted RBP6.9□□□□□ -1.3
PTPN12-214ENST00000520947 MAGEA10P43363 369 aaPredicted RBP6.9□□□□□ -1.3
PTPN12-214ENST00000520947 STAT5BP51692 787 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 NFKB2Q00653 900 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 SLC6A3Q01959 620 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
PTPN12-214ENST00000520947 RNF151Q2KHN1 245 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 GRAMD4Q6IC98 578 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 LRRTM3Q86VH5 581 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 NXPE1Q8N323 547 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 CHST13Q8NET6 341 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 SAMD11Q96NU1 681 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 LMF1Q96S06 567 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 ACSS2Q9NR19 701 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 Q9UFV3 132 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 ZKSCAN5Q9Y2L8 839 aa6.9□□□□□ -1.3
PTPN12-214ENST00000520947 ZNF891A8MT65 544 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-214ENST00000520947 APEX1P27695 318 aaKnown RBP6.89□□□□□ -1.31
PTPN12-214ENST00000520947 FNTBP49356 437 aa6.89□□□□□ -1.31
PTPN12-214ENST00000520947 RGS3P49796 1198 aa6.89□□□□□ -1.31
PTPN12-214ENST00000520947 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
PTPN12-214ENST00000520947 ICAM4Q14773 271 aa6.89□□□□□ -1.31
PTPN12-214ENST00000520947 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
PTPN12-214ENST00000520947 ZMAT1Q5H9K5 638 aa6.89□□□□□ -1.31
PTPN12-214ENST00000520947 FILIP1Q7Z7B0 1213 aa6.89□□□□□ -1.31
PTPN12-214ENST00000520947 RTKN2Q8IZC4 609 aa6.89□□□□□ -1.31
PTPN12-214ENST00000520947 H2AFY2Q9P0M6 372 aaPredicted RBP6.89□□□□□ -1.31
PTPN12-214ENST00000520947 MAGEL2Q9UJ55 1249 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms