RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SNX27Q96L92 541 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 MXRA8Q9BRK3 442 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 APOL5Q9BWW9 433 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 LY9Q9HBG7 655 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 NR2E1Q9Y466 385 aa13.12□□□□□ -0.31
MRPS28-206ENST00000520946 DDX39AO00148 427 aaKnown RBP13.11□□□□□ -0.31
MRPS28-206ENST00000520946 HBP1O60381 514 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 GLP2RO95838 553 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 CHMLP26374 656 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 AVPR2P30518 371 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 NAPAP54920 295 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-206ENST00000520946 DUSP6Q16828 381 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 CES5AQ6NT32 575 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 MIS18BP1Q6P0N0 1132 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 TRMT1LQ7Z2T5 733 aaKnown RBP13.11□□□□□ -0.31
MRPS28-206ENST00000520946 MB21D2Q8IYB1 491 aaPredicted RBP13.11□□□□□ -0.31
MRPS28-206ENST00000520946 METTL13Q8N6R0 699 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 COLGALT1Q8NBJ5 622 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 TMEM87BQ96K49 555 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 PPP1R16BQ96T49 567 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 TYW1Q9NV66 732 aaKnown RBP13.11□□□□□ -0.31
MRPS28-206ENST00000520946 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
MRPS28-206ENST00000520946 TECTAO75443 2155 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 HOXA2O43364 376 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
MRPS28-206ENST00000520946 ZSCAN20P17040 1043 aaPredicted RBP13.1□□□□□ -0.31
MRPS28-206ENST00000520946 ANTXR2P58335 489 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 ERVFC1P60507 584 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 FAM102BQ5T8I3 360 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 ANKRD54Q6NXT1 300 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 PDXDC2PQ6P474 469 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 TMC7Q7Z402 723 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 PCYT2Q99447 389 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 TCF25Q9BQ70 676 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 MTA3Q9BTC8 594 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 TMX1Q9H3N1 280 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 NGRNQ9NPE2 291 aaKnown RBP13.1□□□□□ -0.31
MRPS28-206ENST00000520946 ZNF302Q9NR11 478 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 RGS18Q9NS28 235 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 ST3GAL5Q9UNP4 418 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 NOC2LQ9Y3T9 749 aaKnown RBP13.1□□□□□ -0.31
MRPS28-206ENST00000520946 RBM8AQ9Y5S9 174 aaKnown RBP13.1□□□□□ -0.31
MRPS28-206ENST00000520946 NFASCO94856 1347 aa13.1□□□□□ -0.31
MRPS28-206ENST00000520946 HOXB8P17481 243 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-206ENST00000520946 PPM1AP35813 382 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 ADCY7P51828 1080 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
MRPS28-206ENST00000520946 APOBRQ0VD83 1088 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 TCF15Q12870 199 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 CEP55Q53EZ4 464 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 ZNF484Q5JVG2 852 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 FANCBQ8NB91 859 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 RNF169Q8NCN4 708 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
MRPS28-206ENST00000520946 SCLT1Q96NL6 688 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 MFSD1Q9H3U5 465 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 ERVK-5Q9HDB9 667 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 TMEM161AQ9NX61 479 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 ZNF318Q5VUA4 2279 aa13.09□□□□□ -0.31
MRPS28-206ENST00000520946 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 H0Y858 1186 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
MRPS28-206ENST00000520946 SGSM2O43147 1006 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 ARP10275 920 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 FGFR1P11362 822 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 GSPT1P15170 499 aaKnown RBP13.08□□□□□ -0.32
MRPS28-206ENST00000520946 CRYBB1P53674 252 aaPredicted RBP13.08□□□□□ -0.32
MRPS28-206ENST00000520946 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
MRPS28-206ENST00000520946 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 KIZQ2M2Z5 673 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 SWSAP1Q6NVH7 229 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 CYP2W1Q8TAV3 490 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 SUSD6Q92537 303 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 CASP10Q92851 521 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 ZNF558Q96NG5 402 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 MAP7D2Q96T17 732 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 OSMRQ99650 979 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 TMEM117Q9H0C3 514 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 GLT8D2Q9H1C3 349 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.32
MRPS28-206ENST00000520946 LZTS1Q9Y250 596 aa13.08□□□□□ -0.32
MRPS28-206ENST00000520946 COL1A2P08123 1366 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 C9IYK1 514 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 MGEA5O60502 916 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 PDE4AP27815 886 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 TMOD1P28289 359 aa13.07□□□□□ -0.32
MRPS28-206ENST00000520946 LIFRP42702 1097 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms