RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 EIF3JO75822 258 aaKnown RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 SERPING1P05155 500 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 STAT1P42224 750 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 USP14P54578 494 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 SETQ01105 290 aaPredicted RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 DLK2Q6UY11 383 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 GADL1Q6ZQY3 521 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 IFT81Q8WYA0 676 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 IQCDQ96DY2 449 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 GMLQ99445 158 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 POLR3CQ9BUI4 534 aaPredicted RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 NUCKS1Q9H1E3 243 aaKnown RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 RGS17Q9UGC6 210 aaPredicted RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 FHOD1Q9Y613 1164 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 TAF1LQ8IZX4 1826 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 PDXKO00764 312 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 P4HBP07237 508 aaKnown RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 QARSP47897 775 aaKnown RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 SMTNP53814 917 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 RUFY1Q96T51 708 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 RANBP17Q9H2T7 1088 aaKnown RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 ACBD3Q9H3P7 528 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 TUFT1Q9NNX1 390 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 SIK3Q9Y2K2 1263 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 DLATP10515 647 aaKnown RBP12.42□□□□□ -0.42
CLK4-206ENST00000520878 ITGB5P18084 799 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 SLC7A5Q01650 507 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 KCNMA1Q12791 1236 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 TCHPQ9BT92 498 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 GOLPH3Q9H4A6 298 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 ZNF408Q9H9D4 720 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 EHD2Q9NZN4 543 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 CAPN6Q9Y6Q1 641 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
CLK4-206ENST00000520878 TNFAIP3P21580 790 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 CIITAP33076 1130 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 GCLMP48507 274 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 TUBB2AQ13885 445 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 NCAPG2Q86XI2 1143 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 LPAR1Q92633 364 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 TUBB2BQ9BVA1 445 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 KIFC3Q9BVG8 833 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 CENPHQ9H3R5 247 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 SEPT9Q9UHD8 586 aaPredicted RBP12.41□□□□□ -0.42
CLK4-206ENST00000520878 VAV3Q9UKW4 847 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 KIAA1551Q9HCM1 1747 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 CTNND1O60716 968 aaKnown RBP12.41□□□□□ -0.42
CLK4-206ENST00000520878 KCNA3P22001 575 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 HLTFQ14527 1009 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLK4-206ENST00000520878 TAF3Q5VWG9 929 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 TRIM59Q8IWR1 403 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 KLHL7Q8IXQ5 586 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 GSPT2Q8IYD1 628 aaKnown RBP12.41□□□□□ -0.42
CLK4-206ENST00000520878 ZNF280CQ8ND82 737 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 SYTL5Q8TDW5 730 aaPredicted RBP12.41□□□□□ -0.42
CLK4-206ENST00000520878 FAM212AQ96EL1 285 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 COL20A1Q9P218 1284 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 TISP43B9A030 160 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 PSMD10O75832 226 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 UCHL3P15374 230 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 TGFB2P61812 414 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 PPARDQ03181 441 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 SMC1AQ14683 1233 aaKnown RBP12.41□□□□□ -0.42
CLK4-206ENST00000520878 EDRF1Q3B7T1 1238 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 TKFCQ3LXA3 575 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 SWSAP1Q6NVH7 229 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
CLK4-206ENST00000520878 PPM1KQ8N3J5 372 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 GABBR1Q9UBS5 961 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 UTRNP46939 3433 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 ATRNL1Q5VV63 1379 aa12.41□□□□□ -0.42
CLK4-206ENST00000520878 A0A087X0T9 212 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 RASSF10A6NK89 507 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 CEP104O60308 925 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 PEX10O60683 326 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 FAM228BP0C875 321 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 GYS2P54840 703 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 SOX10P56693 466 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 SPIRE1Q08AE8 756 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 MTERF2Q49AM1 385 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 ALKBH5Q6P6C2 394 aaKnown RBP12.4□□□□□ -0.42
CLK4-206ENST00000520878 JRKLQ9Y4A0 524 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.42
CLK4-206ENST00000520878 IGLV3-22A0A075B6J6 115 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 KCNK3O14649 394 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 PALMO75781 387 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 OAS2P29728 719 aaKnown RBP12.4□□□□□ -0.42
CLK4-206ENST00000520878 YWHABP31946 246 aaKnown RBP12.4□□□□□ -0.42
CLK4-206ENST00000520878 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 SAAL1Q96ER3 474 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 HSD17B14Q9BPX1 270 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 ZMYND15Q9H091 742 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 NR3C2P08235 984 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms