RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 APBA2Q99767 749 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 C7orf25Q9BPX7 421 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 EDEM3Q9BZQ6 932 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 RASSF4Q9H2L5 321 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 MKNK2Q9HBH9 465 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 MCM9Q9NXL9 1143 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 BARHL2Q9NY43 387 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 GDAQ9Y2T3 454 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 EYSQ5T1H1 3165 aa9.53□□□□□ -0.88
CTNNA1-223ENST00000520520 FOCADQ5VW36 1801 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 CYP2D7A0A087X1C5 515 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 hCG_1642624A0A1W2PR95 340 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 H3BQF6 201 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 MPHOSPH10O00566 681 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 XRCC5P13010 732 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 IDEP14735 1019 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 PRLRP16471 622 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 TCP1P17987 556 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 NAPAP54920 295 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 ATP2B2Q01814 1243 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 APBA1Q02410 837 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 LRRC63Q05C16 580 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 PDE4DQ08499 809 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 MAP2K5Q13163 448 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 SEPT2Q15019 361 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 MORN1Q5T089 497 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 MAP3K21Q5TCX8 1036 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 MFSD14CQ5VZR4 134 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 TTI2Q6NXR4 508 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 GBP6Q6ZN66 633 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 NEK8Q86SG6 692 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 ZNF444Q8N0Y2 327 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 C4orf32Q8N8J7 132 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 ZNF507Q8TCN5 953 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 ACER1Q8TDN7 264 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 STAMQ92783 540 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 RRP36Q96EU6 259 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 CCDC42Q96M95 316 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 RUFY1Q96T51 708 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 LBHD1Q9BQE6 289 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 NOC4LQ9BVI4 516 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 EPC1Q9H2F5 836 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 DEF6Q9H4E7 631 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 FLRT1Q9NZU1 646 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 RNF14Q9UBS8 474 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 JRKLQ9Y4A0 524 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 IVNS1ABPQ9Y6Y0 642 aa9.52□□□□□ -0.89
CTNNA1-223ENST00000520520 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 B4DLN1 442 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L15C9J2P7 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L13C9JLJ4 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L11C9JVI0 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L18D6R9N7 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L22D6RA61 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L17D6RBQ6 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 GOLGA8KD6RF30 607 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 STXBP3O00186 592 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 OPA1O60313 960 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 CNMDO75829 334 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PAFAH1B1P43034 410 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PPP4CP60510 307 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 CCNA1P78396 465 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 TFAP4Q01664 338 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PSMD2Q13200 908 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 MAN2A1Q16706 1144 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 ABCB5Q2M3G0 1257 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 LRIT3Q3SXY7 679 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 CERKLQ49MI3 558 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 FAM47AQ5JRC9 791 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 GJC2Q5T442 439 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 CCDC181Q5TID7 509 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 C12orf60Q5U649 245 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 MAMSTRQ6ZN01 415 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 ZNF572Q7Z3I7 529 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 COG1Q8WTW3 980 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 NHEJ1Q9H9Q4 299 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PRDM5Q9NQX1 630 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 MTMR10Q9NXD2 777 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PRKAG2Q9UGJ0 569 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PCDHA6Q9UN73 950 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 ATP11BQ9Y2G3 1177 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 FAN1Q9Y2M0 1017 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PCDHA8Q9Y5H6 950 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 FRMPD3Q5JV73 1810 aa9.51□□□□□ -0.89
CTNNA1-223ENST00000520520 PVALEFA0A1B0GWK0 134 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 M0R2N6 131 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 WNT7AO00755 349 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 KLRC4O43908 158 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 RNF40O75150 1001 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 COL6A1P12109 1028 aa9.5□□□□□ -0.89
CTNNA1-223ENST00000520520 PLCG1P19174 1290 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms