RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 PARD6BQ9BYG5 372 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 TRIM15Q9C019 465 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 USP17L3A6NCW0 530 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 USP17L4A6NCW7 530 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 CFAP73A6NFT4 308 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 UBE2SQ16763 222 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 USP17L1Q7RTZ2 530 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 NUDCD3Q8IVD9 361 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 RFX6Q8HWS3 928 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 KIAA2013Q8IYS2 634 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 ENOX1Q8TC92 643 aaKnown RBP13□□□□□ -0.33
ERGIC1-208ENST00000520399 GIPC2Q8TF65 315 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 TBRG4Q969Z0 631 aaKnown RBP eCLIP13□□□□□ -0.33
ERGIC1-208ENST00000520399 PPWD1Q96BP3 646 aaKnown RBP13□□□□□ -0.33
ERGIC1-208ENST00000520399 PDLIM2Q96JY6 352 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
ERGIC1-208ENST00000520399 NRKQ7Z2Y5 1582 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 NEK2P51955 445 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 MRPS35P82673 323 aaKnown RBP13□□□□□ -0.33
ERGIC1-208ENST00000520399 RNASELQ05823 741 aaKnown RBP13□□□□□ -0.33
ERGIC1-208ENST00000520399 CASP8Q14790 479 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 COA1Q9GZY4 146 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 RFX7Q2KHR2 1363 aa13□□□□□ -0.33
ERGIC1-208ENST00000520399 A6NJR5 290 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 MEIS1O00470 390 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 PLCG1P19174 1290 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 CCNA1P78396 465 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 PPP1R2P3Q6NXS1 205 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 VSTM4Q8IW00 320 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 IFT122Q9HBG6 1241 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 RGL1Q9NZL6 768 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 ADGRB3O60242 1522 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 KRT8P05787 483 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 KPNA2P52292 529 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 GUCY2DQ02846 1103 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 SNX1Q13596 522 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 MESDQ14696 234 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 RESP18Q5W5W9 173 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 FAM160B2Q86V87 743 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 UBN1Q9NPG3 1134 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 ADD3Q9UEY8 706 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 EEF1B2P24534 225 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 PAPOLAP51003 745 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 ARL6IP4Q66PJ3 421 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 MFN1Q8IWA4 741 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 PACSIN2Q9UNF0 486 aaPredicted RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 PLA2G4BP0C869 781 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 C16orf87Q6PH81 154 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 CLEC4GQ6UXB4 293 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 RAPH1Q70E73 1250 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 FAM167BQ9BTA0 163 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 AKT3Q9Y243 479 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 NEDD4P46934 1319 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 CLIC2O15247 247 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 GPR162Q16538 588 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 C10orf76Q5T2E6 689 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 KRT80Q6KB66 452 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 CC2D1AQ6P1N0 951 aaPredicted RBP12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 MCUQ8NE86 351 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 LRRC8CQ8TDW0 803 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 SLC7A3Q8WY07 619 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 ITFG2Q969R8 447 aa12.99□□□□□ -0.33
ERGIC1-208ENST00000520399 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 ZNF263O14978 683 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 KCNA4P22459 653 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 KCNQ4P56696 695 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 CYLC2Q14093 348 aaPredicted RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 RYBPQ8N488 228 aaPredicted RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 DCAF4Q8WV16 495 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 CDHR1Q96JP9 859 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 TRIM45Q9H8W5 580 aaPredicted RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 ZNF148Q9UQR1 794 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 ENC1O14682 589 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 GJA8P48165 433 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 FKBP3Q00688 224 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 TOB2Q14106 344 aaPredicted RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 HLFQ16534 295 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 NHEJ1Q9H9Q4 299 aaPredicted RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 ABCA6Q8N139 1617 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 BCORL1Q5H9F3 1711 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 STK36Q9NRP7 1315 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 PLEKHA8P1O95397 391 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 PSAPP07602 524 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 CCNE1P24864 410 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 MAPK4P31152 587 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 SF3A3Q12874 501 aaKnown RBP eCLIP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 KRT33BQ14525 404 aa12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 SRRM1Q8IYB3 904 aaKnown RBP12.98□□□□□ -0.33
ERGIC1-208ENST00000520399 ANKRD13CQ8N6S4 541 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms