RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CPEP16870 476 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 ECE1P42892 770 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 CDKN1CP49918 316 aaPredicted RBP8.57□□□□□ -1.04
PTPN12-213ENST00000519553 DDB1Q16531 1140 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 BROXQ5VW32 411 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 TTLL7Q6ZT98 887 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 NME9Q86XW9 330 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 CARFQ8N187 725 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 ZNF610Q8N9Z0 462 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 MCM8Q9UJA3 840 aa8.57□□□□□ -1.04
PTPN12-213ENST00000519553 LCHNA4D1U4 455 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 CYP7B1O75881 506 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 FBXO21O94952 628 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 CHGBP05060 677 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 CD40P25942 277 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 IL13P35225 146 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 TMPRSS15P98073 1019 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 CLRN3Q8NCR9 226 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 WDR66Q8TBY9 1149 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 E2F7Q96AV8 911 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 MAML3Q96JK9 1138 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 KRTAP4-12Q9BQ66 201 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 OR10A5Q9H207 317 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 SEMA4AQ9H3S1 761 aa8.56□□□□□ -1.04
PTPN12-213ENST00000519553 DDX3XO00571 662 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPN12-213ENST00000519553 KLHL18O94889 574 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 LSP1P33241 339 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 SARSP49591 514 aaKnown RBP8.55□□□□□ -1.04
PTPN12-213ENST00000519553 RGS3P49796 1198 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 SLC6A3Q01959 620 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 ADCY1Q08828 1119 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 MYBPC3Q14896 1274 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 TTC38Q5R3I4 469 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 TRMT10BQ6PF06 316 aaKnown RBP8.55□□□□□ -1.04
PTPN12-213ENST00000519553 SPATS2Q86XZ4 545 aaKnown RBP8.55□□□□□ -1.04
PTPN12-213ENST00000519553 ATL2Q8NHH9 583 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 ZCRB1Q8TBF4 217 aaKnown RBP8.55□□□□□ -1.04
PTPN12-213ENST00000519553 YTHDC1Q96MU7 727 aaKnown RBP8.55□□□□□ -1.04
PTPN12-213ENST00000519553 SPATA25Q9BR10 227 aa8.55□□□□□ -1.04
PTPN12-213ENST00000519553 PHLDB1Q86UU1 1377 aa8.54□□□□□ -1.04
PTPN12-213ENST00000519553 ULK1O75385 1050 aa8.54□□□□□ -1.04
PTPN12-213ENST00000519553 PHYKPLQ8IUZ5 450 aa8.54□□□□□ -1.04
PTPN12-213ENST00000519553 PRPF38AQ8NAV1 312 aaKnown RBP8.54□□□□□ -1.04
PTPN12-213ENST00000519553 CALML6Q8TD86 181 aa8.54□□□□□ -1.04
PTPN12-213ENST00000519553 ZNF496Q96IT1 587 aaPredicted RBP8.54□□□□□ -1.04
PTPN12-213ENST00000519553 POFUT1Q9H488 388 aa8.54□□□□□ -1.04
PTPN12-213ENST00000519553 GOLGA2P5Q9HBQ8 144 aa8.54□□□□□ -1.04
PTPN12-213ENST00000519553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-213ENST00000519553 MAFO75444 373 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-213ENST00000519553 CDK11BP21127 795 aaKnown RBP8.53□□□□□ -1.04
PTPN12-213ENST00000519553 SLURP1P55000 103 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 ROM1Q03395 351 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 RNF219Q5W0B1 726 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-213ENST00000519553 SLFN12LQ6IEE8 588 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 LCNL1Q6ZST4 164 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 HDGFL2Q7Z4V5 671 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-213ENST00000519553 ZNF761Q86XN6 746 aaPredicted RBP8.53□□□□□ -1.04
PTPN12-213ENST00000519553 C7orf31Q8N865 590 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 NUDT10Q8NFP7 164 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 ADAMTS17Q8TE56 1095 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 COG1Q8WTW3 980 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 NUDT11Q96G61 164 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 TUBGCP5Q96RT8 1024 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 ZDHHC5Q9C0B5 715 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 VTA1Q9NP79 307 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 USP36Q9P275 1121 aaKnown RBP8.53□□□□□ -1.04
PTPN12-213ENST00000519553 MSRAQ9UJ68 235 aa8.53□□□□□ -1.04
PTPN12-213ENST00000519553 H0Y858 1186 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 TRIM13O60858 407 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 SESN3P58005 492 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 CD83Q01151 205 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 PRAMEF9Q5VWM5 478 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 DPP8Q6V1X1 898 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-213ENST00000519553 CXXC5Q7LFL8 322 aaKnown RBP8.52□□□□□ -1.05
PTPN12-213ENST00000519553 KANSL1Q7Z3B3 1105 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 RASSF3Q86WH2 238 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 RPUSD2Q8IZ73 545 aaKnown RBP8.52□□□□□ -1.05
PTPN12-213ENST00000519553 ZSCAN18Q8TBC5 510 aaPredicted RBP8.52□□□□□ -1.05
PTPN12-213ENST00000519553 MYL10Q9BUA6 226 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 L2HGDHQ9H9P8 463 aa8.52□□□□□ -1.05
PTPN12-213ENST00000519553 NOP58Q9Y2X3 529 aaKnown RBP8.52□□□□□ -1.05
PTPN12-213ENST00000519553 ELL2O00472 640 aaPredicted RBP8.51□□□□□ -1.05
PTPN12-213ENST00000519553 KDM1AO60341 852 aa8.51□□□□□ -1.05
PTPN12-213ENST00000519553 PRKD3O94806 890 aa8.51□□□□□ -1.05
PTPN12-213ENST00000519553 APEX1P27695 318 aaKnown RBP8.51□□□□□ -1.05
PTPN12-213ENST00000519553 JAG1P78504 1218 aa8.51□□□□□ -1.05
PTPN12-213ENST00000519553 MOGSQ13724 837 aa8.51□□□□□ -1.05
PTPN12-213ENST00000519553 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
PTPN12-213ENST00000519553 ZBTB41Q5SVQ8 909 aa8.51□□□□□ -1.05
PTPN12-213ENST00000519553 MCTP2Q6DN12 878 aa8.51□□□□□ -1.05
PTPN12-213ENST00000519553 TXNDC5Q8NBS9 432 aaKnown RBP8.51□□□□□ -1.05
PTPN12-213ENST00000519553 TOPORSQ9NS56 1045 aaPredicted RBP8.51□□□□□ -1.05
PTPN12-213ENST00000519553 PRPF6O94906 941 aaKnown RBP8.5□□□□□ -1.05
PTPN12-213ENST00000519553 ZSCAN22P10073 491 aaPredicted RBP8.5□□□□□ -1.05
PTPN12-213ENST00000519553 NCLP19338 710 aaKnown RBP8.5□□□□□ -1.05
PTPN12-213ENST00000519553 NOLC1Q14978 699 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPN12-213ENST00000519553 PDCD1Q15116 288 aa8.5□□□□□ -1.05
PTPN12-213ENST00000519553 WDR72Q3MJ13 1102 aa8.5□□□□□ -1.05
PTPN12-213ENST00000519553 TMEM200BQ69YZ2 307 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms