RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	EIF2AK2	P19525	551 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	EPS15	P42566	896 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	CASP4	P49662	377 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	POLR2F	P61218	127 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	TUBB4B	P68371	445 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	APBA1	Q02410	837 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	TEX35	Q5T0J7	233 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	SFMBT2	Q5VUG0	894 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	RNF207	Q6ZRF8	634 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	FAM178B	Q8IXR5	827 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	DAW1	Q8N136	415 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	SLC35C1	Q96A29	364 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PDCD2L	Q9BRP1	358 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	EPC1	Q9H2F5	836 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	DEF6	Q9H4E7	631 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PXMP2	Q9NR77	195 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PICK1	Q9NRD5	415 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	TBC1D22B	Q9NU19	505 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	FAM53C	Q9NYF3	392 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	AIPL1	Q9NZN9	384 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PKD2L1	Q9P0L9	805 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	DBR1	Q9UK59	544 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	RIPK3	Q9Y572	518 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZHX2	Q9Y6X8	837 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PHIP	Q8WWQ0	1821 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	ANO9	A1A5B4	782 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	ARHGEF35	A5YM69	484 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	CLIC2	O15247	247 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	PJA2	O43164	708 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	TFRC	P02786	760 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	SERPING1	P05155	500 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	EPB41	P11171	864 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	OAZ1	P54368	228 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	SLC9C1	Q4G0N8	1177 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	PRAMEF18	Q5VWM3	479 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	PADI6	Q6TGC4	694 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	TRPM4	Q8TD43	1214 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	RMDN3	Q96TC7	470 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	MKNK1	Q9BUB5	465 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	GPRC5D	Q9NZD1	345 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	OGFR	Q9NZT2	677 aa		13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	PUF60	Q9UHX1	559 aa	Known RBP	13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.59	□□□□□ -0.23
SPIDR-210	ENST00000519362	C19orf81	C9J6K1	198 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	USO1	O60763	962 aa	Known RBP	13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	HIP1R	O75146	1068 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	ATP1A1	P05023	1023 aa	Known RBP	13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	QARS	P47897	775 aa	Known RBP	13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	RARRES1	P49788	294 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	ODR4	Q5SWX8	454 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	STXBP4	Q6ZWJ1	553 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	NLGN2	Q8NFZ4	835 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	SECISBP2L	Q93073	1101 aa	Known RBP	13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	KLRG1	Q96E93	195 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	IKZF4	Q9H2S9	585 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	RNF146	Q9NTX7	359 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	DMAC2	Q9NW81	257 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	FBXL5	Q9UKA1	691 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	SSC5D	A1L4H1	1573 aa		13.58	□□□□□ -0.24
SPIDR-210	ENST00000519362	GTPBP10	A4D1E9	387 aa	Known RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	SPDYE4	A6NLX3	237 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	ENC1	O14682	589 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	ATP9A	O75110	1047 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	SLC9A1	P19634	815 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	PON1	P27169	355 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	DSG3	P32926	999 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	MAGEA1	P43355	309 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	GFPT1	Q06210	699 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	EXOC3L4	Q17RC7	722 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	KLHDC7A	Q5VTJ3	777 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	XRRA1	Q6P2D8	792 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	PARD6B	Q9BYG5	372 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	HDAC6	Q9UBN7	1215 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	ZNF214	Q9UL59	606 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	FZD1	Q9UP38	647 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	PCDHB13	Q9Y5F0	798 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	PPP2R3B	Q9Y5P8	575 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	SAR1B	Q9Y6B6	198 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	COL11A1	P12107	1806 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	MACROD2	A1Z1Q3	448 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	ATP2A1	O14983	1001 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	MAPT	P10636	758 aa	Known RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	MYCL	P12524	364 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	UCHL3	P15374	230 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	PSMC2	P35998	433 aa	Known RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	HMGCS2	P54868	508 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	BAAT	Q14032	418 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	COG2	Q14746	738 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	NOL9	Q5SY16	702 aa	Known RBP	13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	ARHGEF16	Q5VV41	709 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	NSMF	Q6X4W1	530 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	HS2ST1	Q7LGA3	356 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	VSIG10L	Q86VR7	867 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	KSR1	Q8IVT5	923 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	MSANTD4	Q8NCY6	345 aa		13.57	□□□□□ -0.24
SPIDR-210	ENST00000519362	TRIM58	Q8NG06	486 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms