RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SHHQ15465 462 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 GRIK4Q16099 956 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 CCDC183Q5T5S1 534 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 FAM160B1Q5W0V3 765 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 RESP18Q5W5W9 173 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 SWSAP1Q6NVH7 229 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 MIS18BP1Q6P0N0 1132 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 PDXDC2PQ6P474 469 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 FAM173BQ6P4H8 233 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 ABHD15Q6UXT9 468 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 CCDC73Q6ZRK6 1079 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 SERINC5Q86VE9 423 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 TDHQ8IZJ6 230 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 TMEM199Q8N511 208 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 ZBTB10Q96DT7 871 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 FAM212AQ96EL1 285 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 RIT2Q99578 217 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 GTPBP4Q9BZE4 634 aaKnown RBP8.51□□□□□ -1.05
SDCBP-206ENST00000519115 RAB34Q9BZG1 259 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 KCNMB3Q9NPA1 279 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 HOOK1Q9UJC3 728 aaKnown RBP8.51□□□□□ -1.05
SDCBP-206ENST00000519115 HPSEQ9Y251 543 aa8.51□□□□□ -1.05
SDCBP-206ENST00000519115 MYH15Q9Y2K3 1946 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 IGKV6D-21A0A0A0MT36 114 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 POTEB3A0JP26 581 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 WDR64B1ANS9 1081 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 MARCH6O60337 910 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 GADD45BO75293 160 aaPredicted RBP8.5□□□□□ -1.05
SDCBP-206ENST00000519115 MYL1P05976 194 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 PSAPP07602 524 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 CTSHP09668 335 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 CKBP12277 381 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 INSRRP14616 1297 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 MCM7P33993 719 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 THPOP40225 353 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 PTK7Q13308 1070 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 UGCGQ16739 394 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 TRIM71Q2Q1W2 868 aaKnown RBP8.5□□□□□ -1.05
SDCBP-206ENST00000519115 CT47A1Q5JQC4 288 aaPredicted RBP8.5□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF618Q5T7W0 954 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 POTEBQ6S5H4 581 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 RUFY4Q6ZNE9 571 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 MIER3Q7Z3K6 550 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 DEFB128Q7Z7B8 93 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 CKAP2LQ8IYA6 745 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 SMAP1Q8IYB5 467 aaPredicted RBP8.5□□□□□ -1.05
SDCBP-206ENST00000519115 CCDC155Q8N6L0 562 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 RETREG2Q8NC44 543 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 CAGE1Q8TC20 777 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 HAS1Q92839 578 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 RNPC3Q96LT9 517 aaKnown RBP8.5□□□□□ -1.05
SDCBP-206ENST00000519115 FAM20AQ96MK3 541 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 MTMR9Q96QG7 549 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.5□□□□□ -1.05
SDCBP-206ENST00000519115 CUEDC2Q9H467 287 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 IL23AQ9NPF7 189 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF302Q9NR11 478 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 DISC1Q9NRI5 854 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 GABBR1Q9UBS5 961 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 TUBE1Q9UJT0 475 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 FBXO2Q9UK22 296 aaPredicted RBP8.5□□□□□ -1.05
SDCBP-206ENST00000519115 PCDHB6Q9Y5E3 794 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 PCDHA10Q9Y5I2 948 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 NRCAMQ92823 1304 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 IGSF9BQ9UPX0 1349 aa8.5□□□□□ -1.05
SDCBP-206ENST00000519115 LAMA2P24043 3122 aaKnown RBP8.49□□□□□ -1.05
SDCBP-206ENST00000519115 A0A1W2PPC1 479 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 EML1O00423 815 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 SOX1O00570 391 aaPredicted RBP8.49□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF862O60290 1169 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 NEMFO60524 1076 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 IQCF3P0C7M6 154 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 GNAT1P11488 350 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 SELPP16109 830 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 ATP4AP20648 1035 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 MUTP22033 750 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 JAK3P52333 1124 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 ADAM17P78536 824 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 PRKCEQ02156 737 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 PTGDRQ13258 359 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 NBR1Q14596 966 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 GSE1Q14687 1217 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 CALCRLQ16602 461 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 TMEM240Q5SV17 173 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 MARCH8Q5T0T0 291 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 ZNF365Q70YC5 407 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 LRRC8DQ7L1W4 858 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 C16orf59Q7L2K0 433 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 PLPPR4Q7Z2D5 763 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 SLFN12Q8IYM2 578 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 FMR1NBQ8N0W7 255 aaPredicted RBP8.49□□□□□ -1.05
SDCBP-206ENST00000519115 BANK1Q8NDB2 785 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 AFAP1L1Q8TED9 768 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 ATP8B4Q8TF62 1192 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 VWCEQ96DN2 955 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 CCSER1Q9C0I3 900 aa8.49□□□□□ -1.05
SDCBP-206ENST00000519115 FAM49AQ9H0Q0 323 aaPredicted RBP8.49□□□□□ -1.05
SDCBP-206ENST00000519115 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms