RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 RUSC2Q8N2Y8 1516 aa4.67□□□□□ -1.66
ATP6V1C1-204ENST00000518959 KDM5BQ9UGL1 1544 aa4.67□□□□□ -1.66
ATP6V1C1-204ENST00000518959 CDK4P11802 303 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 ITGB6P18564 788 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 PROZP22891 400 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 MEOX1P50221 254 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 GFRA1P56159 465 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 SLC25A3Q00325 362 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 PCOLCEQ15113 449 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 SPTY2D1Q68D10 685 aaPredicted RBP4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 LARP4Q71RC2 724 aaKnown RBP eCLIP4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 SHCBP1Q8NEM2 672 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 OR14K1Q8NGZ2 314 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 HAS1Q92839 578 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 KCNJ15Q99712 375 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 GPRC5BQ9NZH0 403 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 ARHGAP28Q9P2N2 729 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 DSEQ9UL01 958 aa4.66□□□□□ -1.66
ATP6V1C1-204ENST00000518959 DISP3Q9P2K9 1392 aa4.65□□□□□ -1.66
ATP6V1C1-204ENST00000518959 CD109Q6YHK3 1445 aa4.65□□□□□ -1.66
ATP6V1C1-204ENST00000518959 POGZQ7Z3K3 1410 aa4.65□□□□□ -1.66
ATP6V1C1-204ENST00000518959 KIF27Q86VH2 1401 aa4.65□□□□□ -1.66
ATP6V1C1-204ENST00000518959 CD38P28907 300 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 RACK1P63244 317 aaKnown RBP4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 STRIP1Q5VSL9 837 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 GAREM2Q75VX8 874 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 OTOP2Q7RTS6 562 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 PRIMA1Q86XR5 153 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 RTKN2Q8IZC4 609 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ANKRD35Q8N283 1001 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 SHDQ96IW2 340 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 OR10A2Q9H208 303 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 FBXO10Q9UK96 956 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 CDC42EP3Q9UKI2 254 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 PACSIN3Q9UKS6 424 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 FAM184BQ9ULE4 1060 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 TELO2Q9Y4R8 837 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 NPFFR2Q9Y5X5 522 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ARAP3Q8WWN8 1544 aa4.65□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ZAR1LA6NP61 321 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ACOT7O00154 380 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ZNF37AP17032 561 aaPredicted RBP4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 MRE11P49959 708 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 FANCCQ00597 558 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 DBPQ10586 325 aaPredicted RBP4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 KCTD1Q719H9 257 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 FILIP1Q7Z7B0 1213 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ADGRG3Q86Y34 549 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 VRK3Q8IV63 474 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 MPHOSPH9Q99550 1183 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 GPR27Q9NS67 375 aa4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 DDX41Q9UJV9 622 aaKnown RBP4.64□□□□□ -1.67
ATP6V1C1-204ENST00000518959 PTPRMP28827 1452 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 WDR7Q9Y4E6 1490 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 A0A0A6YYK5 440 aaPredicted RBP4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 NKRFO15226 690 aaKnown RBP eCLIP4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 SLC26A4O43511 780 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ZNF16P17020 682 aaPredicted RBP4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 GRK2P25098 689 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 GRK3P35626 688 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 NASPP49321 788 aaPredicted RBP4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 SCNN1GP51170 649 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 MRGPREQ86SM8 312 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ZNF654Q8IZM8 581 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 WDR48Q8TAF3 677 aa4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 NTN5Q8WTR8 489 aaPredicted RBP4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 PDGFDQ9GZP0 370 aaPredicted RBP4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 METTL5Q9NRN9 209 aaKnown RBP4.63□□□□□ -1.67
ATP6V1C1-204ENST00000518959 IQSEC2Q5JU85 1478 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 PCF11O94913 1555 aaKnown RBP4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 MAP3K4Q9Y6R4 1608 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 MSCO60682 206 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 FAM20BO75063 409 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 MAN2A2P49641 1150 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 ZNF362Q5T0B9 420 aaPredicted RBP4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 SLC35F1Q5T1Q4 408 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 Q6ZRM9 215 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 GSPT2Q8IYD1 628 aaKnown RBP4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 SYNE4Q8N205 404 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 FAM169BQ8N8A8 192 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 KCTD13Q8WZ19 329 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 GPRASP2Q96D09 838 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 C1orf159Q96HA4 380 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 PHF20Q9BVI0 1012 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 BACH2Q9BYV9 841 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 SH3BP1Q9Y3L3 701 aa4.62□□□□□ -1.67
ATP6V1C1-204ENST00000518959 BIVM-ERCC5R4GMW8 1640 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 A0A1W2PRX2 142 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 EPHA5P54756 1037 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 IL13RA1P78552 427 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 EIF4HQ15056 248 aaKnown RBP4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 PTPAQ15257 358 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 USP53Q70EK8 1073 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 CXXC5Q7LFL8 322 aaKnown RBP4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 SLC25A43Q8WUT9 341 aaPredicted RBP4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 BBC3Q96PG8 261 aaPredicted RBP4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 CD244Q9BZW8 370 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 AGO3Q9H9G7 860 aaKnown RBP4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 RIC8BQ9NVN3 520 aa4.61□□□□□ -1.67
ATP6V1C1-204ENST00000518959 CARMIL1Q5VZK9 1371 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms