RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	GTPBP6	O43824	516 aa	Predicted RBP	27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	IGFBP4	P22692	258 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	PAK2	Q13177	524 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	KRT40	Q6A162	431 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	FAM117B	Q6P1L5	589 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	TRMT1L	Q7Z2T5	733 aa	Known RBP	27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	FAM184A	Q8NB25	1140 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	TOP1MT	Q969P6	601 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	ZBTB10	Q96DT7	871 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	YME1L1	Q96TA2	773 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	KCNMB3	Q9NPA1	279 aa		27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	RNF216	Q9NWF9	866 aa	Predicted RBP	27.21	■■□□□ 1.95
CNOT7-204	ENST00000518885	ZBTB42	B2RXF5	422 aa		27.2	■■□□□ 1.94
CNOT7-204	ENST00000518885	SLC37A4	O43826	429 aa		27.2	■■□□□ 1.94
CNOT7-204	ENST00000518885	C22orf31	O95567	290 aa		27.2	■■□□□ 1.94
CNOT7-204	ENST00000518885	TMEM62	Q0P6H9	643 aa		27.2	■■□□□ 1.94
CNOT7-204	ENST00000518885	NR5A1	Q13285	461 aa		27.2	■■□□□ 1.94
CNOT7-204	ENST00000518885	PPP2R5C	Q13362	524 aa		27.2	■■□□□ 1.94
CNOT7-204	ENST00000518885	XKR3	Q5GH77	459 aa		27.2	■■□□□ 1.94
CNOT7-204	ENST00000518885	MYH9	P35579	1960 aa	Known RBP	27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	B3GNT9	Q6UX72	402 aa		27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	TMCO2	Q7Z6W1	182 aa	Predicted RBP	27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	KIAA0319L	Q8IZA0	1049 aa		27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	ARNTL2	Q8WYA1	636 aa		27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	C8orf76	Q96K31	380 aa		27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	TGS1	Q96RS0	853 aa	Known RBP	27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	KIF2C	Q99661	725 aa		27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	KIF3A	Q9Y496	699 aa		27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	MICAL3	Q7RTP6	2002 aa		27.19	■■□□□ 1.94
CNOT7-204	ENST00000518885	CD52	P31358	61 aa		27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	PSMC5	P62195	406 aa		27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	HTRA4	P83105	476 aa	Predicted RBP	27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	TBC1D8B	Q0IIM8	1120 aa		27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	TNFRSF25	Q93038	417 aa		27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	GJA10	Q969M2	543 aa		27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	SAMD11	Q96NU1	681 aa		27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	GINS2	Q9Y248	185 aa		27.18	■■□□□ 1.94
CNOT7-204	ENST00000518885	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	BTBD18	B2RXH4	712 aa		27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	ZNF862	O60290	1169 aa		27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	DTNB	O60941	627 aa		27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	UPP2	O95045	317 aa		27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	CRYBB1	P53674	252 aa	Predicted RBP	27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	CDC42EP1	Q00587	391 aa		27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	JPH2	Q9BR39	696 aa	Predicted RBP	27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	SEPT9	Q9UHD8	586 aa	Predicted RBP	27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	PADI3	Q9ULW8	664 aa		27.17	■■□□□ 1.94
CNOT7-204	ENST00000518885	GPR182	O15218	404 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	RPS6KA5	O75582	802 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	QARS	P47897	775 aa	Known RBP	27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	DNM2	P50570	870 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	GNL2	Q13823	731 aa	Known RBP	27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	UGCG	Q16739	394 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	EFCAB12	Q6NXP0	572 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	EXOC8	Q8IYI6	725 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	NIFK	Q9BYG3	293 aa	Known RBP	27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	OSBPL7	Q9BZF2	842 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	TSPYL2	Q9H2G4	693 aa	Predicted RBP	27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	CERS4	Q9HA82	394 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	AKT3	Q9Y243	479 aa		27.16	■■□□□ 1.94
CNOT7-204	ENST00000518885	LCHN	A4D1U4	455 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	ENPP3	O14638	875 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	MCM2	P49736	904 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	FOSB	P53539	338 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	ERVK-21	P61565	698 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	ST3GAL1	Q11201	340 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	POTED	Q86YR6	584 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	SP7	Q8TDD2	431 aa	Predicted RBP	27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	AGO3	Q9H9G7	860 aa	Known RBP	27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	VAV3	Q9UKW4	847 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	PPME1	Q9Y570	386 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	PTPRS	Q13332	1948 aa		27.15	■■□□□ 1.94
CNOT7-204	ENST00000518885	LINC01553	A4QN01	128 aa		27.14	■■□□□ 1.94
CNOT7-204	ENST00000518885	NEMF	O60524	1076 aa		27.14	■■□□□ 1.94
CNOT7-204	ENST00000518885	P4HB	P07237	508 aa	Known RBP	27.14	■■□□□ 1.94
CNOT7-204	ENST00000518885	STAG3L1	P0CL83	205 aa		27.14	■■□□□ 1.94
CNOT7-204	ENST00000518885	POU3F3	P20264	500 aa	Predicted RBP	27.14	■■□□□ 1.94
CNOT7-204	ENST00000518885	ADGRE1	Q14246	886 aa		27.14	■■□□□ 1.94
CNOT7-204	ENST00000518885	CALCRL	Q16602	461 aa		27.14	■■□□□ 1.94
CNOT7-204	ENST00000518885	DDX11L8	A8MPP1	907 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	NFX1	Q12986	1120 aa	Known RBP	27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	EPHA7	Q15375	998 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	KIZ	Q2M2Z5	673 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	EARS2	Q5JPH6	523 aa	Known RBP	27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	BANK1	Q8NDB2	785 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	HAS1	Q92839	578 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	SCLT1	Q96NL6	688 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	FOXP1	Q9H334	677 aa	Predicted RBP	27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	SUGCT	Q9HAC7	445 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	PCDHA12	Q9UN75	941 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	RWDD3	Q9Y3V2	267 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	CHD7	Q9P2D1	2997 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	SI	P14410	1827 aa		27.13	■■□□□ 1.93
CNOT7-204	ENST00000518885	COL4A6	Q14031	1691 aa		27.12	■■□□□ 1.93
CNOT7-204	ENST00000518885	CLCN3	P51790	818 aa		27.12	■■□□□ 1.93
CNOT7-204	ENST00000518885	ORC2	Q13416	577 aa	Predicted RBP	27.12	■■□□□ 1.93
CNOT7-204	ENST00000518885	MTERF2	Q49AM1	385 aa		27.12	■■□□□ 1.93
CNOT7-204	ENST00000518885	NCAPH2	Q6IBW4	605 aa		27.12	■■□□□ 1.93
CNOT7-204	ENST00000518885	OTUD6A	Q7L8S5	288 aa		27.12	■■□□□ 1.93

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms