RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, human

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-204	ENST00000517525	TOP1MT	Q969P6	601 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	PRDM12	Q9H4Q4	367 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	VAV3	Q9UKW4	847 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	CHD9	Q3L8U1	2897 aa		27.75	■■■□□ 2.03
PVT1-204	ENST00000517525	CHMP2A	O43633	222 aa		27.74	■■■□□ 2.03
PVT1-204	ENST00000517525	GAS2L1	Q99501	681 aa	Predicted RBP	27.74	■■■□□ 2.03
PVT1-204	ENST00000517525	ZBED2	Q9BTP6	218 aa		27.74	■■■□□ 2.03
PVT1-204	ENST00000517525	NIFK	Q9BYG3	293 aa	Known RBP	27.74	■■■□□ 2.03
PVT1-204	ENST00000517525	INSL6	Q9Y581	213 aa		27.74	■■■□□ 2.03
PVT1-204	ENST00000517525	MYH9	P35579	1960 aa	Known RBP	27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	MYO9B	Q13459	2157 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	COL6A3	P12111	3177 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	PTPRS	Q13332	1948 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	FAM205C	A6NFA0	338 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	STBD1	O95210	358 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	POU3F3	P20264	500 aa	Predicted RBP	27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	PRKCE	Q02156	737 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	TARBP2	Q15633	366 aa	Known RBP	27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	UGCG	Q16739	394 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	XKR3	Q5GH77	459 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	SLFN12	Q8IYM2	578 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	MAFA	Q8NHW3	353 aa	Predicted RBP	27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	AGO3	Q9H9G7	860 aa	Known RBP	27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	MICAL3	Q7RTP6	2002 aa		27.73	■■■□□ 2.03
PVT1-204	ENST00000517525	TMCO2	Q7Z6W1	182 aa	Predicted RBP	27.72	■■■□□ 2.03
PVT1-204	ENST00000517525	SP7	Q8TDD2	431 aa	Predicted RBP	27.72	■■■□□ 2.03
PVT1-204	ENST00000517525	FTHL17	Q9BXU8	183 aa		27.72	■■■□□ 2.03
PVT1-204	ENST00000517525	ST18	O60284	1047 aa		27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	ARHGEF15	O94989	841 aa		27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	ADGRE1	Q14246	886 aa		27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	SAFB	Q15424	915 aa	Known RBP eCLIP	27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	MYOCD	Q8IZQ8	938 aa		27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	FBXO18	Q8NFZ0	1043 aa		27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	C8orf76	Q96K31	380 aa		27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	CDH23	Q9H251	3354 aa		27.71	■■■□□ 2.03
PVT1-204	ENST00000517525	EML1	O00423	815 aa		27.7	■■■□□ 2.02
PVT1-204	ENST00000517525	ENPP3	O14638	875 aa		27.7	■■■□□ 2.02
PVT1-204	ENST00000517525	PSMC5	P62195	406 aa		27.7	■■■□□ 2.02
PVT1-204	ENST00000517525	POTED	Q86YR6	584 aa		27.7	■■■□□ 2.02
PVT1-204	ENST00000517525	TBC1D32	Q96NH3	1257 aa		27.7	■■■□□ 2.02
PVT1-204	ENST00000517525	CEP89	Q96ST8	783 aa		27.7	■■■□□ 2.02
PVT1-204	ENST00000517525	SI	P14410	1827 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	LCHN	A4D1U4	455 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	DKC1	O60832	514 aa	Known RBP eCLIP	27.69	■■■□□ 2.02	7e-7	■■■■□ 26.6
PVT1-204	ENST00000517525	BAG4	O95429	457 aa	Known RBP	27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	CD52	P31358	61 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	SPIRE1	Q08AE8	756 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	TMEM62	Q0P6H9	643 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	EPHA7	Q15375	998 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	SLC17A8	Q8NDX2	589 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	FOXP1	Q9H334	677 aa	Predicted RBP	27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	PADI3	Q9ULW8	664 aa		27.69	■■■□□ 2.02
PVT1-204	ENST00000517525	COL4A6	Q14031	1691 aa		27.68	■■■□□ 2.02
PVT1-204	ENST00000517525	GPR32	O75388	356 aa		27.68	■■■□□ 2.02
PVT1-204	ENST00000517525	TMOD1	P28289	359 aa		27.68	■■■□□ 2.02
PVT1-204	ENST00000517525	CRYBB1	P53674	252 aa	Predicted RBP	27.68	■■■□□ 2.02
PVT1-204	ENST00000517525	ERVK-21	P61565	698 aa		27.68	■■■□□ 2.02
PVT1-204	ENST00000517525	ODR4	Q5SWX8	454 aa		27.68	■■■□□ 2.02
PVT1-204	ENST00000517525	WDR81	Q562E7	1941 aa		27.68	■■■□□ 2.02
PVT1-204	ENST00000517525	IGKV6-21	A0A0C4DH24	114 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	LINC01553	A4QN01	128 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	RBAK-RBAKDN	I3L0D1	243 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	P4HB	P07237	508 aa	Known RBP	27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	QARS	P47897	775 aa	Known RBP	27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	MCM2	P49736	904 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	ORC2	Q13416	577 aa	Predicted RBP	27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	EFCAB12	Q6NXP0	572 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	CRIPAK	Q8N1N5	446 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	METTL13	Q8N6R0	699 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	TSPYL2	Q9H2G4	693 aa	Predicted RBP	27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	PPME1	Q9Y570	386 aa		27.67	■■■□□ 2.02
PVT1-204	ENST00000517525	PAK2	Q13177	524 aa		27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	TRMT1L	Q7Z2T5	733 aa	Known RBP	27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	RTN4RL1	Q86UN2	441 aa	Predicted RBP	27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	MTMR9	Q96QG7	549 aa		27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	TGS1	Q96RS0	853 aa	Known RBP	27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	MAP7D2	Q96T17	732 aa		27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	CDHR5	Q9HBB8	845 aa		27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	ERVK-5	Q9HDB9	667 aa		27.66	■■■□□ 2.02
PVT1-204	ENST00000517525	MARCH6	O60337	910 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	CDC42EP1	Q00587	391 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	TBC1D8B	Q0IIM8	1120 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	FAM117B	Q6P1L5	589 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	ANO5	Q75V66	913 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	C4orf19	Q8IY42	314 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	FAM184A	Q8NB25	1140 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	LINC01599	Q8WXQ3	324 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	ADAMTS10	Q9H324	1103 aa		27.65	■■■□□ 2.02
PVT1-204	ENST00000517525	CHD7	Q9P2D1	2997 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	TTC3	P53804	2025 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	EPOP	A6NHQ4	379 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	NEMF	O60524	1076 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	CLCN3	P51790	818 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	FOSB	P53539	338 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	CALCRL	Q16602	461 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	BANK1	Q8NDB2	785 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	TMEM40	Q8WWA1	233 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	SAMD11	Q96NU1	681 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	TMX1	Q9H3N1	280 aa		27.64	■■■□□ 2.02
PVT1-204	ENST00000517525	RC3H2	Q9HBD1	1191 aa	Known RBP	27.64	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms