RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PBX2P40425 430 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 TCTN1Q2MV58 587 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 XKR3Q5GH77 459 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 TSHZ1Q6ZSZ6 1077 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 GUCD1Q96NT3 240 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 FAM49AQ9H0Q0 323 aaPredicted RBP14.38□□□□□ -0.11
CLCN3-210ENST00000515420 SLC28A3Q9HAS3 691 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 YBX2Q9Y2T7 364 aaKnown RBP14.38□□□□□ -0.11
CLCN3-210ENST00000515420 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 CDY2AQ9Y6F7 541 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 CHD9Q3L8U1 2897 aa14.38□□□□□ -0.11
CLCN3-210ENST00000515420 CDH23Q9H251 3354 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 MARCH6O60337 910 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 NEMFO60524 1076 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 CD2BP2O95400 341 aaKnown RBP14.37□□□□□ -0.11
CLCN3-210ENST00000515420 AMHP03971 560 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 FOSBP53539 338 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 PSMC5P62195 406 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 SPIRE1Q08AE8 756 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 LPIN1Q14693 890 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 UGCGQ16739 394 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 KIAA0319LQ8IZA0 1049 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 NIFKQ9BYG3 293 aaKnown RBP14.37□□□□□ -0.11
CLCN3-210ENST00000515420 CELF4Q9BZC1 486 aaKnown RBP14.37□□□□□ -0.11
CLCN3-210ENST00000515420 PPME1Q9Y570 386 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 COL6A3P12111 3177 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 MYO9BQ13459 2157 aa14.37□□□□□ -0.11
CLCN3-210ENST00000515420 COL4A6Q14031 1691 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 GJB5O95377 273 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 P4HBP07237 508 aaKnown RBP14.36□□□□□ -0.11
CLCN3-210ENST00000515420 GHRP10912 638 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 U2AF2P26368 475 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLCN3-210ENST00000515420 TMOD1P28289 359 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 QARSP47897 775 aaKnown RBP14.36□□□□□ -0.11
CLCN3-210ENST00000515420 RABGGTBP53611 331 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 DEFB103AP81534 67 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 GUCY1B3Q02153 619 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 EPHA7Q15375 998 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
CLCN3-210ENST00000515420 CALCRLQ16602 461 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 ODR4Q5SWX8 454 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 NOSTRINQ8IVI9 506 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 LINC01465Q8N7H1 131 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 ZBTB10Q96DT7 871 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 CDX2Q99626 313 aaPredicted RBP14.36□□□□□ -0.11
CLCN3-210ENST00000515420 FTHL17Q9BXU8 183 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 NKX2-4Q9H2Z4 354 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 CHD7Q9P2D1 2997 aa14.36□□□□□ -0.11
CLCN3-210ENST00000515420 EML1O00423 815 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 TLL1O43897 1013 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 TBC1D8BQ0IIM8 1120 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 GNL2Q13823 731 aaKnown RBP14.35□□□□□ -0.11
CLCN3-210ENST00000515420 PPP2R2DQ66LE6 453 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 EXOC8Q8IYI6 725 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 NEK9Q8TD19 979 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 FAM161BQ96MY7 647 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 MTMR9Q96QG7 549 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 MAP7D2Q96T17 732 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 RAD9AQ99638 391 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 OSBPL7Q9BZF2 842 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 PCDHA12Q9UN75 941 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.35□□□□□ -0.11
CLCN3-210ENST00000515420 TTC3P53804 2025 aa14.35□□□□□ -0.11
CLCN3-210ENST00000515420 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.34□□□□□ -0.11
CLCN3-210ENST00000515420 STBD1O95210 358 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 CA3P07451 260 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 HTRA4P83105 476 aaPredicted RBP14.34□□□□□ -0.11
CLCN3-210ENST00000515420 CDC42EP1Q00587 391 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 GRIN2CQ14957 1233 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 METTL13Q8N6R0 699 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 BANK1Q8NDB2 785 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 TOP1MTQ969P6 601 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 CEP89Q96ST8 783 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
CLCN3-210ENST00000515420 ZBED2Q9BTP6 218 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 SEPT9Q9UHD8 586 aaPredicted RBP14.34□□□□□ -0.11
CLCN3-210ENST00000515420 NOL7Q9UMY1 257 aaKnown RBP14.34□□□□□ -0.11
CLCN3-210ENST00000515420 INSL6Q9Y581 213 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 ARID2Q68CP9 1835 aa14.34□□□□□ -0.11
CLCN3-210ENST00000515420 IGKV6-21A0A0C4DH24 114 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 WNT7AO00755 349 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 LYPLA2O95372 231 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 MYOGP15173 224 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 CRYBB1P53674 252 aaPredicted RBP14.33□□□□□ -0.12
CLCN3-210ENST00000515420 PAK2Q13177 524 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 EFCAB12Q6NXP0 572 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.33□□□□□ -0.122e-8■■□□□ 13
CLCN3-210ENST00000515420 ANO5Q75V66 913 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 TRMT1LQ7Z2T5 733 aaKnown RBP14.33□□□□□ -0.12
CLCN3-210ENST00000515420 MYOCDQ8IZQ8 938 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 LXNQ9BS40 222 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 ZSWIM4Q9H7M6 989 aa14.33□□□□□ -0.12
CLCN3-210ENST00000515420 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.12
CLCN3-210ENST00000515420 AGO3Q9H9G7 860 aaKnown RBP14.33□□□□□ -0.12
CLCN3-210ENST00000515420 DDX11L8A8MPP1 907 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms