RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 IL9RQ01113 521 aa17.23■□□□□ 0.35
TRIM41-207ENST00000515223 PPP2R3CQ969Q6 453 aa17.23■□□□□ 0.35
TRIM41-207ENST00000515223 Q9H521 79 aa17.23■□□□□ 0.35
TRIM41-207ENST00000515223 ZCCHC11Q5TAX3 1644 aaKnown RBP17.23■□□□□ 0.35
TRIM41-207ENST00000515223 MYO1CO00159 1063 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 MSH2P43246 934 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 RWDD4Q6NW29 188 aaKnown RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 SCN4BQ8IWT1 228 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 CFAP61Q8NHU2 1237 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 SPON1Q9HCB6 807 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 SLC13A4Q9UKG4 626 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 E9PCH4 1651 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 NEMP1O14524 444 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 MAP3K7O43318 606 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 KRT76Q01546 638 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 PCGF5Q86SE9 256 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 VPS39Q96JC1 886 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 TACO1Q9BSH4 297 aaKnown RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 MMTAG2Q9BU76 263 aaKnown RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 STK38LQ9Y2H1 464 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 SPATA31A3Q5VYP0 1347 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 FDX1P10109 184 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 CCNE1P24864 410 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 SLC7A5Q01650 507 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 C10orf76Q5T2E6 689 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 LRRC31Q6UY01 552 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 BEST2Q8NFU1 509 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 FGD4Q96M96 766 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 RNF146Q9NTX7 359 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 MAGED2Q9UNF1 606 aaPredicted RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 E2F4Q16254 413 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 CD209Q9NNX6 404 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 HPCAL4Q9UM19 191 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 ZBED1O96006 694 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 FCER1AP12319 257 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 GPSM2P81274 684 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
TRIM41-207ENST00000515223 OLA1Q9NTK5 396 aaKnown RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 FARP1Q9Y4F1 1045 aaPredicted RBP17.22■□□□□ 0.35
TRIM41-207ENST00000515223 FRMD3A2A2Y4 597 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 MOCS3O95396 460 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 CDR2Q01850 454 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 SPP2Q13103 211 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 SLC12A1Q13621 1099 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 RESP18Q5W5W9 173 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PANX2Q96RD6 677 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 ABCF3Q9NUQ8 709 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 SCINQ9Y6U3 715 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 ZBTB5O15062 677 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PLCG1P19174 1290 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 CCZ1BP86790 482 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 CCZ1P86791 482 aaPredicted RBP17.21■□□□□ 0.35
TRIM41-207ENST00000515223 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PDZD8Q8NEN9 1154 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 SH3GLB2Q9NR46 395 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PNPLA6Q8IY17 1366 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PIH1D3Q9NQM4 214 aaKnown RBP17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 SRGAP2O75044 1071 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 SNAP25P60880 206 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 IFT88Q13099 833 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 SH3RF3Q8TEJ3 882 aaPredicted RBP17.21■□□□□ 0.35
TRIM41-207ENST00000515223 DACT3Q96B18 629 aaPredicted RBP17.21■□□□□ 0.35
TRIM41-207ENST00000515223 PAGE5Q96GU1 130 aa17.21■□□□□ 0.35
TRIM41-207ENST00000515223 MYCBPQ99417 103 aaPredicted RBP17.21■□□□□ 0.35
TRIM41-207ENST00000515223 GOLGA8IPA6NC78 632 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 GOLGA8JA6NMD2 632 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 EVI5O60447 810 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 CHEK2O96017 543 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 SPOPLQ6IQ16 392 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 GSPT2Q8IYD1 628 aaKnown RBP17.2■□□□□ 0.34
TRIM41-207ENST00000515223 MMP19Q99542 508 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 ABCB11O95342 1321 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 PGRMC1O00264 195 aaKnown RBP17.2■□□□□ 0.34
TRIM41-207ENST00000515223 TTI1O43156 1089 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 STMN1P16949 149 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 LRRC63Q05C16 580 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 SNX1Q13596 522 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 RAET1EQ8TD07 263 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRIM41-207ENST00000515223 C2orf40Q9H1Z8 148 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 MFAP3LO75121 409 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 BAG2O95816 211 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 KLC3Q6P597 504 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 FAM133AQ8N9E0 248 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 N4BP2L2Q92802 583 aaPredicted RBP17.2■□□□□ 0.34
TRIM41-207ENST00000515223 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 CYP27A1Q02318 531 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 NUDT18Q6ZVK8 323 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 TULP4Q9NRJ4 1543 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 IL1RL1Q01638 556 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 ZNF568Q3ZCX4 644 aa17.2■□□□□ 0.34
TRIM41-207ENST00000515223 NDUFA10O95299 355 aa17.19■□□□□ 0.34
TRIM41-207ENST00000515223 DPF2Q92785 391 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms