RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 HACE1Q8IYU2 909 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 FAM149B1Q96BN6 582 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 ELF1P32519 619 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 PMS2P54278 862 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 GDAQ9Y2T3 454 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 SYNGAP1Q96PV0 1343 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 LGALS16A8MUM7 142 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-214ENST00000515035 POLGP54098 1239 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-214ENST00000515035 KCTD6Q8NC69 237 aa14.26□□□□□ -0.13
TCOF1-214ENST00000515035 TGS1Q96RS0 853 aaKnown RBP14.26□□□□□ -0.13
TCOF1-214ENST00000515035 ENO4A6NNW6 628 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 GUCY1A3Q02108 690 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 FSCBQ5H9T9 825 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 TRIM67Q6ZTA4 783 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 GIPC2Q8TF65 315 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 ACCSQ96QU6 501 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 OSBPL9Q96SU4 736 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 TRPV6Q9H1D0 765 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 MLXIPQ9HAP2 919 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 HEG1Q9ULI3 1381 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 MIF4GDA9UHW6 222 aaKnown RBP14.25□□□□□ -0.13
TCOF1-214ENST00000515035 BTDP43251 543 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 PHKA1P46020 1223 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 STAT2P52630 851 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 IFRD2Q12894 506 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-214ENST00000515035 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
TCOF1-214ENST00000515035 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 BATF3Q9NR55 127 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 SYCE1LA8MT33 242 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 M0R2C6 588 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 SH2B2O14492 632 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-214ENST00000515035 CTIFO43310 598 aaKnown RBP14.25□□□□□ -0.13
TCOF1-214ENST00000515035 PPP1R37O75864 691 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 VSNL1P62760 191 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 PSPC1Q8WXF1 523 aaKnown RBP14.25□□□□□ -0.13
TCOF1-214ENST00000515035 HDAC6Q9UBN7 1215 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 GCFC2P16383 781 aaKnown RBP14.25□□□□□ -0.13
TCOF1-214ENST00000515035 ADORA1P30542 326 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 DRP2Q13474 957 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 NECTIN1Q15223 517 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 RESP18Q5W5W9 173 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 SLC30A9Q6PML9 568 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 SLC17A8Q8NDX2 589 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 BTBD6Q96KE9 485 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 BPIFA3Q9BQP9 254 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 SNX5Q9Y5X3 404 aa14.25□□□□□ -0.13
TCOF1-214ENST00000515035 ADGRL3Q9HAR2 1447 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ARL4AP40617 200 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 SCNN1DP51172 638 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 NEK2P51955 445 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ARFIP2P53365 341 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 TSTA3Q13630 321 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ZBTB41Q5SVQ8 909 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 RNF103-CHMP3A0A140T963 221 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 TCP10L2B9ZVM9 353 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 LRRC14Q15048 493 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 FAM182BQ5T319 152 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 SLFN13Q68D06 897 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ICA1LQ8NDH6 482 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 DDX47Q9H0S4 455 aaKnown RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 TAF1DQ9H5J8 278 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 M0QZ92 97 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ZBED1O96006 694 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ARL4CP56559 192 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 CERKLQ49MI3 558 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 TBC1D10BQ4KMP7 808 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 TTLL11Q8NHH1 800 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ATP10DQ9P241 1426 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 PALLDQ8WX93 1383 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 ABL1P00519 1130 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 FAM96AQ9H5X1 160 aa14.24□□□□□ -0.13
TCOF1-214ENST00000515035 CDK12Q9NYV4 1490 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-214ENST00000515035 SORBS3O60504 671 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 PIGBQ92521 554 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 AMNQ9BXJ7 453 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 ADCY10Q96PN6 1610 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 KRT38O76015 456 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 ICA1Q05084 483 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 SIRT2Q8IXJ6 389 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 WDR64B1ANS9 1081 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 RNF207Q6ZRF8 634 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 PALMDQ9NP74 551 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 PLA2R1Q13018 1463 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 CFAP69A5D8W1 941 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 MEIS1O00470 390 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 ARHGEF9O43307 516 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 DIAPH2O60879 1101 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 TEDDM1Q5T9Z0 273 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 RNF169Q8NCN4 708 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 SEPT8Q92599 483 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 IL17RAQ96F46 866 aa14.23□□□□□ -0.13
TCOF1-214ENST00000515035 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms