RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ZNF484Q5JVG2 852 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 HAUS3Q68CZ6 603 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 SWSAP1Q6NVH7 229 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 MIER3Q7Z3K6 550 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 RPAINQ86UA6 219 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 FERMT3Q86UX7 667 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 CCDC60Q8IWA6 550 aaPredicted RBP7.96□□□□□ -1.14
SMAD1-213ENST00000514778 FAM126BQ8IXS8 530 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 C4orf19Q8IY42 314 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 DIS3LQ8TF46 1054 aaKnown RBP7.96□□□□□ -1.14
SMAD1-213ENST00000514778 PCYT2Q99447 389 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 POLR3CQ9BUI4 534 aaPredicted RBP7.96□□□□□ -1.14
SMAD1-213ENST00000514778 NIFKQ9BYG3 293 aaKnown RBP7.96□□□□□ -1.14
SMAD1-213ENST00000514778 TMEM60Q9H2L4 133 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 ZSWIM4Q9H7M6 989 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 TUFT1Q9NNX1 390 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 GTF2IRD1Q9UHL9 959 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 SAMM50Q9Y512 469 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 SRPRBQ9Y5M8 271 aaKnown RBP7.96□□□□□ -1.14
SMAD1-213ENST00000514778 GRIN2DO15399 1336 aa7.96□□□□□ -1.14
SMAD1-213ENST00000514778 DDX39AO00148 427 aaKnown RBP7.95□□□□□ -1.14
SMAD1-213ENST00000514778 MAGEB2O15479 319 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 PPP6R2O75170 966 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 PARNO95453 639 aaKnown RBP7.95□□□□□ -1.14
SMAD1-213ENST00000514778 SMIM10L2AP0DMW4 78 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 SMIM10L2BP0DMW5 78 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 RPA1P27694 616 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 TECP42680 631 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 RTP1P59025 263 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 ADAM17P78536 824 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 SP4Q02446 784 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 MLLT1Q03111 559 aaPredicted RBP7.95□□□□□ -1.14
SMAD1-213ENST00000514778 RBL2Q08999 1139 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 PTPAQ15257 358 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 SF3A1Q15459 793 aaKnown RBP7.95□□□□□ -1.14
SMAD1-213ENST00000514778 UTP14CQ5TAP6 766 aaKnown RBP7.95□□□□□ -1.14
SMAD1-213ENST00000514778 TAF2Q6P1X5 1199 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 OTUD6AQ7L8S5 288 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 CCDC155Q8N6L0 562 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 KCNG4Q8TDN1 519 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 RNPEPQ9H4A4 650 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 GABBR1Q9UBS5 961 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 LRWD1Q9UFC0 647 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 RBM19Q9Y4C8 960 aaKnown RBP7.95□□□□□ -1.14
SMAD1-213ENST00000514778 NR2E3Q9Y5X4 410 aa7.95□□□□□ -1.14
SMAD1-213ENST00000514778 C17orf102A2RUQ5 167 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 MBLAC1A4D2B0 266 aaPredicted RBP7.94□□□□□ -1.14
SMAD1-213ENST00000514778 EML1O00423 815 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 KIAA0355O15063 1070 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 CHMP2AO43633 222 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 GAS2O43903 313 aaKnown RBP7.94□□□□□ -1.14
SMAD1-213ENST00000514778 SORBS3O60504 671 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 SLITRK3O94933 977 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 OATP04181 439 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 CLTBP09497 229 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 ATP4AP20648 1035 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 PSMC6P62333 389 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 KRT85P78386 507 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 CDC42EP1Q00587 391 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 TLE2Q04725 743 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 FAAP100Q0VG06 881 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 PPFIA1Q13136 1202 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 PTK7Q13308 1070 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 PLCB4Q15147 1175 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 LRRC26Q2I0M4 334 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 TRIM60Q495X7 471 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 HYIQ5T013 277 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 KRT79Q5XKE5 535 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 NCAPH2Q6IBW4 605 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 SERINC5Q86VE9 423 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 NME8Q8N427 588 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 LINC00301Q8NCQ3 95 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 CAGE1Q8TC20 777 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 IPO9Q96P70 1041 aaKnown RBP7.94□□□□□ -1.14
SMAD1-213ENST00000514778 NACC1Q96RE7 527 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 USP28Q96RU2 1077 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 EIF2AK1Q9BQI3 630 aaKnown RBP7.94□□□□□ -1.14
SMAD1-213ENST00000514778 JPH2Q9BR39 696 aaPredicted RBP7.94□□□□□ -1.14
SMAD1-213ENST00000514778 SCAND2PQ9GZW5 306 aaPredicted RBP7.94□□□□□ -1.14
SMAD1-213ENST00000514778 NT5C3AQ9H0P0 336 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 ANKEF1Q9NU02 776 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 HDAC6Q9UBN7 1215 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 DBR1Q9UK59 544 aaKnown RBP7.94□□□□□ -1.14
SMAD1-213ENST00000514778 RCOR1Q9UKL0 485 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 ZDHHC9Q9Y397 364 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 PCDHA2Q9Y5H9 948 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 KDM3AQ9Y4C1 1321 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 CENPFP49454 3210 aa7.94□□□□□ -1.14
SMAD1-213ENST00000514778 SMIM35A0A1B0GVV1 85 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 VWA3AA6NCI4 1184 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 SPTLC2O15270 562 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 ZNF862O60290 1169 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 B4GALT4O60513 344 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 STBD1O95210 358 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 SPATA31C1P0DKV0 1188 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 INSRRP14616 1297 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 YWHABP31946 246 aaKnown RBP7.93□□□□□ -1.14
SMAD1-213ENST00000514778 RFC5P40937 340 aa7.93□□□□□ -1.14
SMAD1-213ENST00000514778 BFSP2Q13515 415 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms