RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 OSBP2Q969R2 916 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 DNAJC2Q99543 621 aaKnown RBP3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 YIPF4Q9BSR8 244 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 PHF20Q9BVI0 1012 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 SPATA9Q9BWV2 254 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 EPN3Q9H201 632 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 PLA2G3Q9NZ20 509 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 COA3Q9Y2R0 106 aaPredicted RBP3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 X6R8D5 127 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 KDM2BQ8NHM5 1336 aa3.1□□□□□ -1.91
SMARCAD1-208ENST00000514232 IQCA1LA6NCM1 817 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 H7BY64 318 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 LTFP02788 710 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 SSRP1Q08945 709 aaKnown RBP3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 RBL2Q08999 1139 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 MAP4K2Q12851 820 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 IFRD2Q12894 506 aaPredicted RBP3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 SMAD2Q15796 467 aaKnown RBP3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 PHF19Q5T6S3 580 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 MROH9Q5TGP6 573 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 STEAP3Q658P3 488 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 ST13P5Q8NFI4 369 aaPredicted RBP3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 PIP4K2CQ8TBX8 421 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 CLEC4DQ8WXI8 215 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 SGSM3Q96HU1 749 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 CDC6Q99741 560 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 C1QTNF7Q9BXJ2 289 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 CCDC113Q9H0I3 377 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 CDIP1Q9H305 208 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 TOR3AQ9H497 397 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 HSPBP1Q9NZL4 362 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 RBPJLQ9UBG7 517 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 MSRB2Q9Y3D2 182 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 NPFFR2Q9Y5X5 522 aa3.09□□□□□ -1.91
SMARCAD1-208ENST00000514232 SETD1BQ9UPS6 1966 aaKnown RBP3.09□□□□□ -1.92
SMARCAD1-208ENST00000514232 TRBV23-1A0A0A0MS06 115 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 TCRBV5S2A0A599 114 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 DNAJC9-AS1A6NH13 148 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 HGSO14964 777 aaPredicted RBP3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 NKRFO15226 690 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 TADA3O75528 432 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 ZFPL1O95159 310 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 FGFR1P11362 822 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 PTGS2P35354 604 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 RBM10P98175 930 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 RASGRF1Q13972 1273 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 ATG9BQ674R7 924 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 LBX2Q6XYB7 198 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 RIOX2Q8IUF8 465 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 LRRC47Q8N1G4 583 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 THEMISQ8N1K5 641 aaPredicted RBP3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 DTX3Q8N9I9 347 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 DCAF4Q8WV16 495 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 CFHR4Q92496 578 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 LENG9Q96B70 501 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 EXOC2Q96KP1 924 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 C8orf37Q96NL8 207 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 SRPK1Q96SB4 655 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 NELL2Q99435 816 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 DNAJC7Q99615 494 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 MLST8Q9BVC4 326 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 IPPKQ9H8X2 491 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 MSL2Q9HCI7 577 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 GPR27Q9NS67 375 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 SIRPGQ9P1W8 387 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 ZNF652Q9Y2D9 606 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 PCDHA9Q9Y5H5 950 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 PCDHA8Q9Y5H6 950 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 COL4A3Q01955 1670 aa3.08□□□□□ -1.92
SMARCAD1-208ENST00000514232 KCNK3O14649 394 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 ADCY3O60266 1144 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 DGKIO75912 1065 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 SOD2P04179 222 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 SRGAP2CP0DJJ0 459 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 NOLC1Q14978 699 aaKnown RBP eCLIP3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 SF3A1Q15459 793 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 TESK1Q15569 626 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 ZNF568Q3ZCX4 644 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 FBXO42Q6P3S6 717 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 HDGFL2Q7Z4V5 671 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 SRRM1Q8IYB3 904 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 IFNL3Q8IZI9 196 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 ZBTB38Q8NAP3 1195 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 HAS1Q92839 578 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 DEPDC7Q96QD5 511 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 HIRIP3Q9BW71 556 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 SNTG2Q9NY99 539 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 MYOTQ9UBF9 498 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 PCDHB4Q9Y5E5 795 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 SPATA31A6Q5VVP1 1343 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 CNTNAP2Q9UHC6 1331 aa3.07□□□□□ -1.92
SMARCAD1-208ENST00000514232 TCRBV5S4A2TA0A5A2 114 aa3.06□□□□□ -1.92
SMARCAD1-208ENST00000514232 GNAT1P11488 350 aa3.06□□□□□ -1.92
SMARCAD1-208ENST00000514232 GRK2P25098 689 aa3.06□□□□□ -1.92
SMARCAD1-208ENST00000514232 GRK3P35626 688 aa3.06□□□□□ -1.92
SMARCAD1-208ENST00000514232 GPR85P60893 370 aa3.06□□□□□ -1.92
SMARCAD1-208ENST00000514232 SERINC3Q13530 473 aa3.06□□□□□ -1.92
SMARCAD1-208ENST00000514232 NFYCQ13952 458 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms