RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
HTT-213ENST00000513806 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
HTT-213ENST00000513806 GOLPH3LQ9H4A5 285 aa12.67□□□□□ -0.38
HTT-213ENST00000513806 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
HTT-213ENST00000513806 UMODL1Q5DID0 1318 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 TANC1Q9C0D5 1861 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 HBP1O60381 514 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 FAAP100Q0VG06 881 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 DRP2Q13474 957 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 PTGISQ16647 500 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 TMEM119Q4V9L6 283 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 XKR3Q5GH77 459 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 HAUS3Q68CZ6 603 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 MAEAQ7L5Y9 396 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 DHX38Q92620 1227 aaKnown RBP12.66□□□□□ -0.38
HTT-213ENST00000513806 CEP170P1Q96L14 293 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 AK8Q96MA6 479 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 FAM49AQ9H0Q0 323 aaPredicted RBP12.66□□□□□ -0.38
HTT-213ENST00000513806 PRDM5Q9NQX1 630 aaPredicted RBP12.66□□□□□ -0.38
HTT-213ENST00000513806 NRBP2Q9NSY0 501 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 BLOC1S4Q9NUP1 217 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 MORC2Q9Y6X9 1032 aaPredicted RBP12.66□□□□□ -0.38
HTT-213ENST00000513806 LTBP2Q14767 1821 aa12.66□□□□□ -0.38
HTT-213ENST00000513806 TET1Q8NFU7 2136 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
HTT-213ENST00000513806 NPHP3-ACAD11A0A0J9YXS1 232 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 USO1O60763 962 aaKnown RBP12.65□□□□□ -0.38
HTT-213ENST00000513806 CD4P01730 458 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 SSBP05455 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
HTT-213ENST00000513806 KLRC1P26715 233 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 HOXC8P31273 242 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 SLC26A2P50443 739 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 CLCN3P51790 818 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 ADAM17P78536 824 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 TMEM62Q0P6H9 643 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 MCM6Q14566 821 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 TARBP2Q15633 366 aaKnown RBP12.65□□□□□ -0.38
HTT-213ENST00000513806 RESP18Q5W5W9 173 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 FSIP1Q8NA03 581 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 STAMQ92783 540 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 FAM167AQ96KS9 214 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 NIFKQ9BYG3 293 aaKnown RBP12.65□□□□□ -0.38
HTT-213ENST00000513806 CCSER1Q9C0I3 900 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 BHMT2Q9H2M3 363 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 CYP26B1Q9NR63 512 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
HTT-213ENST00000513806 NRCAMQ92823 1304 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 LYPLA2O95372 231 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 C22orf31O95567 290 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 PFKFB1P16118 471 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 SYN1P17600 705 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 ITGB8P26012 769 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 RARRES1P49788 294 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
HTT-213ENST00000513806 RAD51AP2Q09MP3 1159 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
HTT-213ENST00000513806 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 ZNF484Q5JVG2 852 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 HYIQ5T013 277 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 METTL13Q8N6R0 699 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 DNAJB3Q8WWF6 145 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 DPF3Q92784 378 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 DHX58Q96C10 678 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 CALML4Q96GE6 196 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 NACC1Q96RE7 527 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 OSBPL7Q9BZF2 842 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 PPP1R12CQ9BZL4 782 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 SUGCTQ9HAC7 445 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 GPRC5CQ9NQ84 441 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 PDLIM7Q9NR12 457 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 ZMYND8Q9ULU4 1186 aaPredicted RBP12.64□□□□□ -0.39
HTT-213ENST00000513806 NOD1Q9Y239 953 aa12.64□□□□□ -0.39
HTT-213ENST00000513806 KDM3AQ9Y4C1 1321 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 ARHGEF35A5YM69 484 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 TRIM43BA6NCK2 446 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 POLR2DO15514 142 aaKnown RBP12.63□□□□□ -0.39
HTT-213ENST00000513806 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
HTT-213ENST00000513806 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
HTT-213ENST00000513806 EYA4O95677 639 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 VTNP04004 478 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 CTSHP09668 335 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 CASP1P29466 404 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 NDUFA8P51970 172 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 PTPN11Q06124 597 aaPredicted RBP12.63□□□□□ -0.39
HTT-213ENST00000513806 TBC1D8BQ0IIM8 1120 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 TRIM71Q2Q1W2 868 aaKnown RBP12.63□□□□□ -0.39
HTT-213ENST00000513806 RRAGBQ5VZM2 374 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 ADALQ6DHV7 355 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 EFCAB12Q6NXP0 572 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 ANKRD33Q7Z3H0 272 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 KSR1Q8IVT5 923 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 GRAMD1CQ8IYS0 662 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 RAD54LQ92698 747 aa12.63□□□□□ -0.39
HTT-213ENST00000513806 TMEM143Q96AN5 459 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms