RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 HS6ST3Q8IZP7 471 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 MRPL38Q96DV4 380 aaKnown RBP8.26□□□□□ -1.09
HTT-212ENST00000513639 UHRF1Q96T88 793 aaPredicted RBP8.26□□□□□ -1.09
HTT-212ENST00000513639 NCOA5Q9HCD5 579 aaKnown RBP8.26□□□□□ -1.09
HTT-212ENST00000513639 VPS54Q9P1Q0 977 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 PADI3Q9ULW8 664 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 PCDHA4Q9UN74 947 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 TRPV2Q9Y5S1 764 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 KDM3AQ9Y4C1 1321 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 MUC3AQ02505 3323 aa8.26□□□□□ -1.09
HTT-212ENST00000513639 GAS7O60861 476 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 RPS6KA5O75582 802 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 ARHGEF15O94989 841 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 CD52P31358 61 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 JAK3P52333 1124 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 CRYBB1P53674 252 aaPredicted RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 GPM6BQ13491 265 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 BTG3Q14201 252 aaPredicted RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 Q4G0T1 1027 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 NAALADL2Q58DX5 795 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 CCDC60Q8IWA6 550 aaPredicted RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 BLIDQ8IZY5 108 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 METTL13Q8N6R0 699 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 RDM1Q8NG50 284 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 ADAMTS19Q8TE59 1207 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 TBCKQ8TEA7 893 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 WASF1Q92558 559 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 RNF25Q96BH1 459 aaPredicted RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 NAP1L4Q99733 375 aaKnown RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 C17orf80Q9BSJ5 609 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 C11orf84Q9BUA3 381 aaPredicted RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 OSBPL7Q9BZF2 842 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 UPF3BQ9BZI7 483 aaKnown RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 AGO3Q9H9G7 860 aaKnown RBP8.25□□□□□ -1.09
HTT-212ENST00000513639 DISC1Q9NRI5 854 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 GABBR1Q9UBS5 961 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 LRFN2Q9ULH4 789 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 PCDHB7Q9Y5E2 793 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 IGSF9BQ9UPX0 1349 aa8.25□□□□□ -1.09
HTT-212ENST00000513639 REV3LO60673 3130 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.24□□□□□ -1.09
HTT-212ENST00000513639 DENND3A2RUS2 1198 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 C5orf67F2Z3F1 127 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 MSH4O15457 936 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 DGKIO75912 1065 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 ATP4AP20648 1035 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 DNM2P50570 870 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 TFF2Q03403 129 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 TMEM62Q0P6H9 643 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
HTT-212ENST00000513639 STK3Q13188 491 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 NONOQ15233 471 aaKnown RBP eCLIP8.24□□□□□ -1.09
HTT-212ENST00000513639 TIGD5Q53EQ6 642 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 LRCH2Q5VUJ6 765 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 KRT40Q6A162 431 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 MOXD1Q6UVY6 613 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 SLC24A5Q71RS6 500 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 KRT25Q7Z3Z0 450 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 RTN4RL1Q86UN2 441 aaPredicted RBP8.24□□□□□ -1.09
HTT-212ENST00000513639 NPAS4Q8IUM7 802 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 EXOC8Q8IYI6 725 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 BANK1Q8NDB2 785 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 GDPD5Q8WTR4 605 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 TRAPPC12Q8WVT3 735 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 SLC5A5Q92911 643 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 CLP1Q92989 425 aaKnown RBP8.24□□□□□ -1.09
HTT-212ENST00000513639 ZNF689Q96CS4 500 aaPredicted RBP8.24□□□□□ -1.09
HTT-212ENST00000513639 MAP7D2Q96T17 732 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 TEKT3Q9BXF9 490 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 LMAN2LQ9H0V9 348 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 C1orf112Q9NSG2 853 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 GINS2Q9Y248 185 aa8.24□□□□□ -1.09
HTT-212ENST00000513639 CCDC194A0A1B0GVG4 234 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 ZBTB42B2RXF5 422 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 MARCH6O60337 910 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 PFKFB2O60825 505 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 DKC1O60832 514 aaKnown RBP eCLIP8.23□□□□□ -1.09
HTT-212ENST00000513639 CHRM1P11229 460 aaPredicted RBP8.23□□□□□ -1.09
HTT-212ENST00000513639 ZSCAN20P17040 1043 aaPredicted RBP8.23□□□□□ -1.09
HTT-212ENST00000513639 CTNNB1P35222 781 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 EFCAB12Q6NXP0 572 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 TRMT1LQ7Z2T5 733 aaKnown RBP8.23□□□□□ -1.09
HTT-212ENST00000513639 SPRED2Q7Z698 418 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 CMTR2Q8IYT2 770 aaKnown RBP8.23□□□□□ -1.09
HTT-212ENST00000513639 DAGLBQ8NCG7 672 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 RASGRP4Q8TDF6 673 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 P2RX5Q93086 422 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 PPP2R3CQ969Q6 453 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 LENG9Q96B70 501 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 ZBTB10Q96DT7 871 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 FAM20AQ96MK3 541 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 UIMC1Q96RL1 719 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 LARP6Q9BRS8 491 aaKnown RBP8.23□□□□□ -1.09
HTT-212ENST00000513639 NIFKQ9BYG3 293 aaKnown RBP8.23□□□□□ -1.09
HTT-212ENST00000513639 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
HTT-212ENST00000513639 RGS18Q9NS28 235 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms