RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ZMYND12Q9H0C1 365 aa11.19□□□□□ -0.62
CCL28-203ENST00000513525 PRDM6Q9NQX0 595 aa11.19□□□□□ -0.62
CCL28-203ENST00000513525 PKD2L1Q9P0L9 805 aa11.19□□□□□ -0.62
CCL28-203ENST00000513525 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
CCL28-203ENST00000513525 MTCH2Q9Y6C9 303 aa11.19□□□□□ -0.62
CCL28-203ENST00000513525 PRPF3O43395 683 aaKnown RBP11.18□□□□□ -0.62
CCL28-203ENST00000513525 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
CCL28-203ENST00000513525 ATG7O95352 703 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 AMHP03971 560 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 CTSHP09668 335 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 ARP10275 920 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 HTRA4P83105 476 aaPredicted RBP11.18□□□□□ -0.62
CCL28-203ENST00000513525 CCDC85BQ15834 202 aaPredicted RBP11.18□□□□□ -0.62
CCL28-203ENST00000513525 GRIK4Q16099 956 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 NTRK3Q16288 839 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 PKN1Q16512 942 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCL28-203ENST00000513525 ARNTL2Q8WYA1 636 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 GLG1Q92896 1179 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 RNF26Q9BY78 433 aaPredicted RBP11.18□□□□□ -0.62
CCL28-203ENST00000513525 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 CERS4Q9HA82 394 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 AGO4Q9HCK5 861 aaKnown RBP11.18□□□□□ -0.62
CCL28-203ENST00000513525 TMEM260Q9NX78 707 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 TUBE1Q9UJT0 475 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 NAP1L2Q9ULW6 460 aaPredicted RBP11.18□□□□□ -0.62
CCL28-203ENST00000513525 INSL6Q9Y581 213 aa11.18□□□□□ -0.62
CCL28-203ENST00000513525 LINC01553A4QN01 128 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 RRN3P2A6NIE6 340 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 RFXAPO00287 272 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 LPXNO60711 386 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 CYP3A4P08684 503 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 MARK3P27448 753 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 ACTR2P61160 394 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 ERVK-21P61565 698 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 MGAT3Q09327 533 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 ITGB3BPQ13352 177 aaPredicted RBP11.17□□□□□ -0.62
CCL28-203ENST00000513525 PKP1Q13835 747 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 LAPTM4AQ15012 233 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 MARCH8Q5T0T0 291 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 RUFY4Q6ZNE9 571 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 PLPPR4Q7Z2D5 763 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 SPRED2Q7Z698 418 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 RSPH3Q86UC2 560 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 TGS1Q96RS0 853 aaKnown RBP11.17□□□□□ -0.62
CCL28-203ENST00000513525 AZI2Q9H6S1 392 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 C6orf50Q9HD87 102 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 LMCD1Q9NZU5 365 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 SMC3Q9UQE7 1217 aa11.17□□□□□ -0.62
CCL28-203ENST00000513525 IGLV3-22A0A075B6J6 115 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 IGKV6D-21A0A0A0MT36 114 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 CHRNA1P02708 482 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 INSRRP14616 1297 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 IFNAR1P17181 557 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 GNA11P29992 359 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 SLC26A2P50443 739 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 MRPS5P82675 430 aaKnown RBP11.16□□□□□ -0.62
CCL28-203ENST00000513525 GRB10Q13322 594 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 REXO1Q8N1G1 1221 aaKnown RBP11.16□□□□□ -0.62
CCL28-203ENST00000513525 TOP1MTQ969P6 601 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 ASB2Q96Q27 587 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
CCL28-203ENST00000513525 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 RABGEF1Q9UJ41 708 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 BDP1A6H8Y1 2624 aa11.16□□□□□ -0.62
CCL28-203ENST00000513525 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
CCL28-203ENST00000513525 PPP1R3GB7ZBB8 358 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 FAM86B1E9PN63 330 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 FAM86B2P0C5J1 330 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.62
CCL28-203ENST00000513525 ZNF76P36508 570 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 STAT5BP51692 787 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 SETQ01105 290 aaPredicted RBP11.15□□□□□ -0.62
CCL28-203ENST00000513525 AKAP17AQ02040 695 aaKnown RBP11.15□□□□□ -0.62
CCL28-203ENST00000513525 PLCB4Q15147 1175 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 ME3Q16798 604 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 JAKMIP3Q5VZ66 844 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 PLA2G4DQ86XP0 818 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 CCDC148Q8NFR7 591 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 BICD2Q8TD16 824 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 DNAJB3Q8WWF6 145 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 PHKBQ93100 1093 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 SAMD11Q96NU1 681 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 TPCN1Q9ULQ1 816 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 PLXNA4Q9HCM2 1894 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 MYO7AQ13402 2215 aa11.15□□□□□ -0.62
CCL28-203ENST00000513525 RBAK-RBAKDNI3L0D1 243 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 IPO5O00410 1097 aaKnown RBP11.14□□□□□ -0.63
CCL28-203ENST00000513525 ADAMTS3O15072 1205 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 DHX15O43143 795 aaKnown RBP11.14□□□□□ -0.63
CCL28-203ENST00000513525 LARGE1O95461 756 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 CCNE2O96020 404 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 MRPS6P82932 125 aaKnown RBP11.14□□□□□ -0.63
CCL28-203ENST00000513525 TOB2Q14106 344 aaPredicted RBP11.14□□□□□ -0.63
CCL28-203ENST00000513525 LPIN1Q14693 890 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 KLHL40Q2TBA0 621 aa11.14□□□□□ -0.63
CCL28-203ENST00000513525 FBXO47Q5MNV8 452 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms