RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 TTC12Q9H892 705 aaPredicted RBP17.87■□□□□ 0.45
DDX41-214ENST00000512334 TRPV2Q9Y5S1 764 aa17.87■□□□□ 0.45
DDX41-214ENST00000512334 SZT2Q5T011 3432 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 DDX11L8A8MPP1 907 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 MAGEB2O15479 319 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 DKC1O60832 514 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX41-214ENST00000512334 EFCAB14O75071 495 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 SLC34A2O95436 690 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 P4HBP07237 508 aaKnown RBP17.86■□□□□ 0.45
DDX41-214ENST00000512334 U2AF2P26368 475 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX41-214ENST00000512334 QARSP47897 775 aaKnown RBP17.86■□□□□ 0.45
DDX41-214ENST00000512334 WDR5P61964 334 aaKnown RBP17.86■□□□□ 0.45
DDX41-214ENST00000512334 TBC1D8BQ0IIM8 1120 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 EPHA7Q15375 998 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 RAB30Q15771 203 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 MTERF2Q49AM1 385 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 LARP1BQ659C4 914 aaKnown RBP17.86■□□□□ 0.45
DDX41-214ENST00000512334 NME8Q8N427 588 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 TIFAQ96CG3 184 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 IFIH1Q9BYX4 1025 aaKnown RBP17.86■□□□□ 0.45
DDX41-214ENST00000512334 TMEM60Q9H2L4 133 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 GINS2Q9Y248 185 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 EVPLQ92817 2033 aa17.86■□□□□ 0.45
DDX41-214ENST00000512334 TMEM150BA6NC51 233 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 SIP14410 1827 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 TRAPPC10P48553 1259 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 CLCN3P51790 818 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 CYP4A11Q02928 519 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 SPIRE1Q08AE8 756 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 CUL4AQ13619 759 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 NBR1Q14596 966 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 LPIN1Q14693 890 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 FBXO47Q5MNV8 452 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 EFCAB12Q6NXP0 572 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 KIAA0319LQ8IZA0 1049 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 PHOSPHO2Q8TCD6 241 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 APBB2Q92870 758 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 DYDC2Q96IM9 177 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 MTMR9Q96QG7 549 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 PPP1R16BQ96T49 567 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 SH2D3AQ9BRG2 576 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 LXNQ9BS40 222 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 CELF4Q9BZC1 486 aaKnown RBP17.85■□□□□ 0.45
DDX41-214ENST00000512334 SUGCTQ9HAC7 445 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 RGL1Q9NZL6 768 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 AKT3Q9Y243 479 aa17.85■□□□□ 0.45
DDX41-214ENST00000512334 GBF1Q92538 1859 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 OR52Z1P0C646 297 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 TMOD1P28289 359 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 DEFB103AP81534 67 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 ORC2Q13416 577 aaPredicted RBP17.84■□□□□ 0.45
DDX41-214ENST00000512334 CTTNQ14247 550 aaKnown RBP17.84■□□□□ 0.45
DDX41-214ENST00000512334 PLA2G4FQ68DD2 849 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 HERC6Q8IVU3 1022 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 LRRC71Q8N4P6 559 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 NIFKQ9BYG3 293 aaKnown RBP17.84■□□□□ 0.45
DDX41-214ENST00000512334 NKX2-4Q9H2Z4 354 aa17.84■□□□□ 0.45
DDX41-214ENST00000512334 TMEM265A0A087WTH1 108 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 K7ELQ4 463 aaPredicted RBP17.83■□□□□ 0.44
DDX41-214ENST00000512334 AMHP03971 560 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 VTNP04004 478 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 MYOGP15173 224 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.83■□□□□ 0.44
DDX41-214ENST00000512334 TSHZ1Q6ZSZ6 1077 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 TMCO2Q7Z6W1 182 aaPredicted RBP17.83■□□□□ 0.44
DDX41-214ENST00000512334 TPH2Q8IWU9 490 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 MYOCDQ8IZQ8 938 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 EIF2AK1Q9BQI3 630 aaKnown RBP17.83■□□□□ 0.44
DDX41-214ENST00000512334 ZBED2Q9BTP6 218 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 TTYH1Q9H313 450 aaPredicted RBP17.83■□□□□ 0.44
DDX41-214ENST00000512334 SEMA6BQ9H3T3 888 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 MTMR10Q9NXD2 777 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.44
DDX41-214ENST00000512334 YBX2Q9Y2T7 364 aaKnown RBP17.83■□□□□ 0.44
DDX41-214ENST00000512334 PCDHA11Q9Y5I1 949 aa17.83■□□□□ 0.44
DDX41-214ENST00000512334 MICAL3Q7RTP6 2002 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 POTEMA6NI47 508 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 STBD1O95210 358 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 CD52P31358 61 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 TECP42680 631 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 TARBP2Q15633 366 aaKnown RBP17.82■□□□□ 0.44
DDX41-214ENST00000512334 KIZQ2M2Z5 673 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 FAM117BQ6P1L5 589 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 ANO5Q75V66 913 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 C4orf19Q8IY42 314 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 USP38Q8NB14 1042 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 CEP170P1Q96L14 293 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 ZNF576Q9H609 170 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 ZSWIM4Q9H7M6 989 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 SLC28A3Q9HAS3 691 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 PCDHB6Q9Y5E3 794 aa17.82■□□□□ 0.44
DDX41-214ENST00000512334 KDM3AQ9Y4C1 1321 aa17.81■□□□□ 0.44
DDX41-214ENST00000512334 PTPRSQ13332 1948 aa17.81■□□□□ 0.44
DDX41-214ENST00000512334 LOXHD1Q8IVV2 1947 aa17.81■□□□□ 0.44
DDX41-214ENST00000512334 TLL1O43897 1013 aa17.81■□□□□ 0.44
DDX41-214ENST00000512334 YWHABP31946 246 aaKnown RBP17.81■□□□□ 0.44
DDX41-214ENST00000512334 TOB1P50616 345 aaPredicted RBP17.81■□□□□ 0.44
DDX41-214ENST00000512334 PAK2Q13177 524 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms