RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 INPP4AQ96PE3 977 aaPredicted RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 SH3GL2Q99962 352 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 WDR11Q9BZH6 1224 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 RANBP17Q9H2T7 1088 aaKnown RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 SIX2Q9NPC8 291 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 RBM12Q9NTZ6 932 aaKnown RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 RGL1Q9NZL6 768 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 RSPH10B2B2RC85 870 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 PPP1R12BO60237 982 aaPredicted RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 TBC1D12O60347 775 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 PHACTR2O75167 634 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 GCNT3O95395 438 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 VIL1P09327 827 aaKnown RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 RSPH10BP0C881 870 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 ACTN1P12814 892 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 PSMC2P35998 433 aaKnown RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 NPEPPSP55786 919 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 AOC3Q16853 763 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 CEP55Q53EZ4 464 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 LRCH2Q5VUJ6 765 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 ALKBH5Q6P6C2 394 aaKnown RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 B3GNT9Q6UX72 402 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 STXBP4Q6ZWJ1 553 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 TMEM174Q8WUU8 243 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 FAM151AQ8WW52 585 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 PBKQ96KB5 322 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 NACC1Q96RE7 527 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 WDR18Q9BV38 432 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 PARVGQ9HBI0 331 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 TMOD2Q9NZR1 351 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 TMEM59LQ9UK28 342 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 ODF2LQ9ULJ1 636 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 MRPL11Q9Y3B7 192 aaKnown RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 OPA1O60313 960 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 FAM13AO94988 1023 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 APBA3O96018 575 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 FERP16591 822 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 PRELPP51888 382 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 SETQ01105 290 aaPredicted RBP10.1□□□□□ -0.79
CPNE4-210ENST00000512332 ARID5AQ03989 594 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 MYBPC2Q14324 1141 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 FKBP1CQ5VVH2 108 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 SND1Q7KZF4 910 aaKnown RBP eCLIP10.1□□□□□ -0.79
CPNE4-210ENST00000512332 ZNF720Q7Z2F6 126 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 FAM160B2Q86V87 743 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 LRRC57Q8N9N7 239 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
CPNE4-210ENST00000512332 LMBR1Q8WVP7 490 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 FIZ1Q96SL8 496 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 PSMB7Q99436 277 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 DMAC2Q9NW81 257 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 EP400Q96L91 3159 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 FRMPD4Q14CM0 1322 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 SPDYE2BA6NHP3 402 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 YDJCA8MPS7 323 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 TULP2O00295 520 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 FTCDO95954 541 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 SPDYE6P0CI01 402 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 ECE1P42892 770 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 MATR3P43243 847 aaKnown RBP eCLIP10.1□□□□□ -0.79
CPNE4-210ENST00000512332 CASP4P49662 377 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 PPP2R5AQ15172 486 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 RPS6KA1Q15418 735 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 SLFN11Q7Z7L1 901 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 SLC9A9Q8IVB4 645 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 TPH2Q8IWU9 490 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 GSPT2Q8IYD1 628 aaKnown RBP10.1□□□□□ -0.79
CPNE4-210ENST00000512332 SPICE1Q8N0Z3 855 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 MREGQ8N565 214 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 MYCT1Q8N699 235 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 NEK9Q8TD19 979 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 ACTRT1Q8TDG2 376 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 MS4A14Q96JA4 679 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 PACSIN1Q9BY11 444 aa10.1□□□□□ -0.79
CPNE4-210ENST00000512332 A6NNZ2 444 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GOLGA8KD6RF30 607 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GAS7O60861 476 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 SHOX2O60902 331 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-210ENST00000512332 CFBP00751 764 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GUCY2CP25092 1073 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 STAT1P42224 750 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 SLC7A5Q01650 507 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 KCNA1Q09470 495 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 PPFIA1Q13136 1202 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 CTTNQ14247 550 aaKnown RBP10.09□□□□□ -0.79
CPNE4-210ENST00000512332 TUBB8Q3ZCM7 444 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 DCAF17Q5H9S7 520 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-210ENST00000512332 KIAA1755Q5JYT7 1200 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 FAM186BQ8IYM0 893 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 PIGOQ8TEQ8 1089 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 TAF4BQ92750 862 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 DYDC2Q96IM9 177 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 CALR3Q96L12 384 aaKnown RBP10.09□□□□□ -0.79
CPNE4-210ENST00000512332 GDAP1L1Q96MZ0 367 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 RIT2Q99578 217 aa10.09□□□□□ -0.79
CPNE4-210ENST00000512332 STRA6Q9BX79 667 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms