RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 ZNF543Q08ER8 600 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 FAM102BQ5T8I3 360 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 TMC5Q6UXY8 1006 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 FAM43BQ6ZT52 329 aaPredicted RBP9□□□□□ -0.97
DEPDC1B-205ENST00000512078 TRIM50Q86XT4 487 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 FEZF2Q8TBJ5 459 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 DNAJB3Q8WWF6 145 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 RSAD2Q8WXG1 361 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 APPBP2Q92624 585 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 OSBP2Q969R2 916 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 CLUAP1Q96AJ1 413 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 PDCD2LQ9BRP1 358 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 TMX1Q9H3N1 280 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 SFXN1Q9H9B4 322 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 SPATA6Q9NWH7 488 aaPredicted RBP9□□□□□ -0.97
DEPDC1B-205ENST00000512078 IGSF9BQ9UPX0 1349 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 ADAMTS20P59510 1910 aa9□□□□□ -0.97
DEPDC1B-205ENST00000512078 MBLAC1A4D2B0 266 aaPredicted RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 TMEM8BA6NDV4 472 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 LRRN2O75325 713 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 ZIC2O95409 532 aaPredicted RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 APPP05067 770 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 TOP1P11387 765 aaKnown RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 EPCAMP16422 314 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 RING1Q06587 406 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 PAK2Q13177 524 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 LETM2Q2VYF4 491 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 CEP85Q6P2H3 762 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 DCLRE1AQ6PJP8 1040 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 KCNT2Q6UVM3 1135 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 PRR23CQ6ZRP0 262 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 SLC44A3Q8N4M1 653 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 GPKOWQ92917 476 aaPredicted RBP eCLIP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 NXPE3Q969Y0 559 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 KIF1BPQ96EK5 621 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 BCO2Q9BYV7 579 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 TUBE1Q9UJT0 475 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 TRPV2Q9Y5S1 764 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 SMG1Q96Q15 3661 aaKnown RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 COL4A3Q01955 1670 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 MTCL1Q9Y4B5 1905 aaKnown RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 EVPLQ92817 2033 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 PATL2C9JE40 543 aaKnown RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 N4BP1O75113 896 aaKnown RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 SNHG28P0DPA3 235 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 MYCLP12524 364 aaPredicted RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 MAGEA9P43362 315 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 GHRHRQ02643 423 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 IER5Q5VY09 327 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 LAIR1Q6GTX8 287 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 METTL7BQ6UX53 244 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 VSIG10LQ86VR7 867 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 SLC22A17Q8WUG5 538 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 GLG1Q92896 1179 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 ZNF558Q96NG5 402 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 TMEM47Q9BQJ4 181 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 TMEM121BQ9BXQ6 578 aaPredicted RBP8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 NACAP1Q9BZK3 213 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 BCAS3Q9H6U6 928 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 SLC2A4RGQ9NR83 387 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 C1orf112Q9NSG2 853 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 EPS15L1Q9UBC2 864 aa8.99□□□□□ -0.97
DEPDC1B-205ENST00000512078 SPAG17Q6Q759 2223 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 SRRM3A6NNA2 597 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 FOXD2O60548 495 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 RETP07949 1114 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 IBSPP21815 317 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 HSD17B4P51659 736 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 PPFIA1Q13136 1202 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 PGM5Q15124 567 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 PTPN14Q15678 1187 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 CSRP2Q16527 193 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 CDC37Q16543 378 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 IL31Q6EBC2 164 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 C15orf39Q6ZRI6 1047 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 CABP7Q86V35 215 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 SHDQ96IW2 340 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 FAM126AQ9BYI3 521 aaPredicted RBP8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 OSBPL6Q9BZF3 934 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 SEMA4GQ9NTN9 838 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 SPG21Q9NZD8 308 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 RAB23Q9ULC3 237 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 MRPL11Q9Y3B7 192 aaKnown RBP8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 IRAK3Q9Y616 596 aa8.98□□□□□ -0.97
DEPDC1B-205ENST00000512078 KDM3AQ9Y4C1 1321 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 KANSL1LA0AUZ9 987 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 C9IYK1 514 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 M0QZ92 97 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 M0R2C6 588 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 TM4SF5O14894 197 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 GDF9O60383 454 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 MGEA5O60502 916 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 PBX3P40426 434 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 LIMK1P53667 647 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 NEDD9Q14511 834 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 BMS1Q14692 1282 aaKnown RBP8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 GRIK4Q16099 956 aa8.97□□□□□ -0.97
DEPDC1B-205ENST00000512078 MARCH8Q5T0T0 291 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms