RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 SOX5P35711 763 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 E2F5Q15329 346 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 ZMYM1Q5SVZ6 1142 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 FSD1LQ9BXM9 530 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 PARD6BQ9BYG5 372 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 ZBBXA8MT70 800 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 JAK3P52333 1124 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 TOGARAM2Q6ZUX3 1019 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 EPAS1Q99814 870 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 ICE2Q659A1 982 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 AP5M1Q9H0R1 490 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 PSAPP07602 524 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 CEBPAP49715 358 aaPredicted RBP15.48■□□□□ 0.07
TRIO-218ENST00000512070 NUDCD3Q8IVD9 361 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 RNF169Q8NCN4 708 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 SERPINI2O75830 405 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 PNMA6AP0CW24 399 aaPredicted RBP15.48■□□□□ 0.07
TRIO-218ENST00000512070 EPHB1P54762 984 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 PTK2BQ14289 1009 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 NAALADL2Q58DX5 795 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 PLEKHA4Q9H4M7 779 aa15.48■□□□□ 0.07
TRIO-218ENST00000512070 ADD1P35611 737 aaKnown RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 CLCN6P51797 869 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 AP1B1Q10567 949 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 ENAHQ8N8S7 591 aaPredicted RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 BTBD6Q96KE9 485 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 NDST4Q9H3R1 872 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 COG4Q9H9E3 785 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 FBLN1P23142 703 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 EIF4A1P60842 406 aaKnown RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 C1orf146Q5VVC0 180 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 BATF3Q9NR55 127 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.47■□□□□ 0.074e-7■■□□□ 14.4
TRIO-218ENST00000512070 HPCAL4Q9UM19 191 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 PTPRTO14522 1441 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 IFNAR1P17181 557 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 UBE2TQ9NPD8 197 aaPredicted RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 TBK1Q9UHD2 729 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 REREQ9P2R6 1566 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 MAP3K15Q6ZN16 1313 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 PDE8BO95263 885 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 LCA5Q86VQ0 697 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 RYBPQ8N488 228 aaPredicted RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 CEP70Q8NHQ1 597 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 DACH2Q96NX9 599 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 CARD14Q9BXL6 1004 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 CEP72Q9P209 647 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 PER1O15534 1290 aaPredicted RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 SULF1Q8IWU6 871 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 RPF1Q9H9Y2 349 aaKnown RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 KRT87PA6NCN2 255 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 INO80B-WBP1J3KQ70 363 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 TFAMQ00059 246 aaKnown RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 ENOSF1Q7L5Y1 443 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 FAM133AQ8N9E0 248 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 INO80BQ9C086 356 aaPredicted RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 OLFML3Q9NRN5 406 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 CLIC4Q9Y696 253 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 DEAF1O75398 565 aaPredicted RBP15.47■□□□□ 0.07
TRIO-218ENST00000512070 LAMB3Q13751 1172 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 KRT33BQ14525 404 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 KRT24Q2M2I5 525 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 WDR19Q8NEZ3 1342 aa15.47■□□□□ 0.07
TRIO-218ENST00000512070 VGLL3A8MV65 326 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 C2orf54Q08AI8 447 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 KIAA1841Q6NSI8 718 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 FAM167AQ96KS9 214 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 UIMC1Q96RL1 719 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 ENC1O14682 589 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 MYO1DO94832 1006 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 ZRANB2O95218 330 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIO-218ENST00000512070 PSMA2P25787 234 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 EIF4A3P38919 411 aaKnown RBP15.46■□□□□ 0.07
TRIO-218ENST00000512070 SLC12A1Q13621 1099 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 KIAA1755Q5JYT7 1200 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 USP44Q9H0E7 712 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 hCG_1642624A0A1W2PR95 340 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 EFTUD2Q15029 972 aaKnown RBP eCLIP15.46■□□□□ 0.074e-6■■■■■ 27.3
TRIO-218ENST00000512070 MCPH1Q8NEM0 835 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 PPARGC1AQ9UBK2 798 aaKnown RBP15.46■□□□□ 0.07
TRIO-218ENST00000512070 CHRNA3P32297 505 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 ITPRIPL1Q6GPH6 555 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 ASNSD1Q9NWL6 643 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 FRMD3A2A2Y4 597 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 IL10P22301 178 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 TNFAIP2Q03169 654 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIO-218ENST00000512070 MAN1B1Q9UKM7 699 aa15.46■□□□□ 0.07
TRIO-218ENST00000512070 ATICP31939 592 aa15.46■□□□□ 0.06
TRIO-218ENST00000512070 ABCE1P61221 599 aaKnown RBP15.46■□□□□ 0.06
TRIO-218ENST00000512070 KYAT1Q16773 422 aa15.46■□□□□ 0.06
TRIO-218ENST00000512070 DPCR1Q3MIW9 517 aa15.46■□□□□ 0.06
TRIO-218ENST00000512070 SYDE1Q6ZW31 735 aaPredicted RBP15.46■□□□□ 0.06
TRIO-218ENST00000512070 HOMEZQ8IX15 550 aa15.46■□□□□ 0.06
TRIO-218ENST00000512070 TRIM54Q9BYV2 358 aa15.46■□□□□ 0.06
TRIO-218ENST00000512070 PRPF3O43395 683 aaKnown RBP15.46■□□□□ 0.06
TRIO-218ENST00000512070 SH3GL3Q99963 347 aa15.46■□□□□ 0.06
TRIO-218ENST00000512070 PALMDQ9NP74 551 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms