RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 USTQ9Y2C2 406 aa13.32□□□□□ -0.28
RNF4-216ENST00000511859 SPTBN2O15020 2390 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 KRT76Q01546 638 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 TMEM62Q0P6H9 643 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 ATAT1Q5SQI0 421 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 FAM102BQ5T8I3 360 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 TMC7Q7Z402 723 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 TDRD5Q8NAT2 981 aaKnown RBP13.31□□□□□ -0.28
RNF4-216ENST00000511859 FLCNQ8NFG4 579 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 GPRASP2Q96D09 838 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 CWH43Q9H720 699 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 CNNM2Q9H8M5 875 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 LIMD1Q9UGP4 676 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 EVPLQ92817 2033 aa13.31□□□□□ -0.28
RNF4-216ENST00000511859 KMT2BQ9UMN6 2715 aaPredicted RBP13.3□□□□□ -0.28
RNF4-216ENST00000511859 SMIM35A0A1B0GVV1 85 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 HIDE1A8MVS5 230 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 MAFGO15525 162 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 ATP9AO75110 1047 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 ASGR2P07307 311 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 KCNA2P16389 499 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 PPM1AP35813 382 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 PDE1AP54750 535 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 APOBRQ0VD83 1088 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 MRPL43Q8N983 215 aaKnown RBP13.3□□□□□ -0.28
RNF4-216ENST00000511859 DTWD2Q8NBA8 298 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 CUL5Q93034 780 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 ADAM2Q99965 735 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 SMOC2Q9H3U7 446 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
RNF4-216ENST00000511859 HCFC2Q9Y5Z7 792 aa13.3□□□□□ -0.28
RNF4-216ENST00000511859 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 C9IYK1 514 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 GPR182O15218 404 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 PI15O43692 258 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 RPS6KA5O75582 802 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 NPR3P17342 541 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 IBSPP21815 317 aaPredicted RBP13.29□□□□□ -0.28
RNF4-216ENST00000511859 FAM189BP81408 668 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 BMS1Q14692 1282 aaKnown RBP13.29□□□□□ -0.28
RNF4-216ENST00000511859 SEC23AQ15436 765 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 IMMTQ16891 758 aaKnown RBP13.29□□□□□ -0.28
RNF4-216ENST00000511859 TMEM266Q2M3C6 531 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 CWF19L1Q69YN2 538 aaKnown RBP13.29□□□□□ -0.28
RNF4-216ENST00000511859 AZI2Q9H6S1 392 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 ERVK-5Q9HDB9 667 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 TMEM161AQ9NX61 479 aa13.29□□□□□ -0.28
RNF4-216ENST00000511859 DBR1Q9UK59 544 aaKnown RBP13.29□□□□□ -0.28
RNF4-216ENST00000511859 CYTH3O43739 400 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 MGEA5O60502 916 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 PDE4AP27815 886 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 SMC1AQ14683 1233 aaKnown RBP13.28□□□□□ -0.28
RNF4-216ENST00000511859 GRM4Q14833 912 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 SLC35G1Q2M3R5 365 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 ANKRD45Q5TZF3 282 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 KCNT2Q6UVM3 1135 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 KIAA2013Q8IYS2 634 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 ZBTB10Q96DT7 871 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 CDH22Q9UJ99 828 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 ST3GAL5Q9UNP4 418 aa13.28□□□□□ -0.28
RNF4-216ENST00000511859 C2orf71A6NGG8 1288 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 MEIS2O14770 477 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 HOXA2O43364 376 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 KRT37O76014 449 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 EOMESO95936 686 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 TDGQ13569 410 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 MTHFD1LQ6UB35 978 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 PLPPR4Q7Z2D5 763 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 ACSF2Q96CM8 615 aaPredicted RBP13.27□□□□□ -0.29
RNF4-216ENST00000511859 ZNF558Q96NG5 402 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 PCYT2Q99447 389 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 DLL3Q9NYJ7 618 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 SPG21Q9NZD8 308 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 HCSTQ9UBK5 93 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 NOC2LQ9Y3T9 749 aaKnown RBP13.27□□□□□ -0.29
RNF4-216ENST00000511859 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 CACNA1IQ9P0X4 2223 aa13.27□□□□□ -0.29
RNF4-216ENST00000511859 FANCMQ8IYD8 2048 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 CLASP2O75122 1294 aaKnown RBP13.26□□□□□ -0.29
RNF4-216ENST00000511859 FGFR1P11362 822 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 SDSP20132 328 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 MTMR1Q13613 665 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 LRRC55Q6ZSA7 311 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 RILPL2Q969X0 211 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 CNTNAP3BQ96NU0 1288 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 DSCC1Q9BVC3 393 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 CNTNAP3Q9BZ76 1288 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 DZANK1Q9NVP4 752 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
RNF4-216ENST00000511859 GINS2Q9Y248 185 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms