RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 TSHZ2Q9NRE2 1034 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 FRYLO94915 3013 aa21.82■■□□□ 1.08
HMGCS1-206ENST00000511774 SMIM35A0A1B0GVV1 85 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 PBX3P40426 434 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 WTAPQ15007 396 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 LRRC55Q6ZSA7 311 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 FRMD5Q7Z6J6 570 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 CYP2W1Q8TAV3 490 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 CDHR1Q96JP9 859 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 JADE2Q9NQC1 790 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 RGS18Q9NS28 235 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 RNF19AQ9NV58 838 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 GINS2Q9Y248 185 aa21.81■■□□□ 1.08
HMGCS1-206ENST00000511774 PLEKHA8P1O95397 391 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 RPLP2P05387 115 aaKnown RBP21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 ASGR2P07307 311 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 PTH1RQ03431 593 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 IGDCC4Q8TDY8 1250 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 MRPS27Q92552 414 aaKnown RBP21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 TCF25Q9BQ70 676 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 JPH1Q9HDC5 661 aaPredicted RBP21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 AAASQ9NRG9 546 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 SLC9A2Q9UBY0 812 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 SORCS3Q9UPU3 1222 aa21.8■■□□□ 1.08
HMGCS1-206ENST00000511774 WEE2P0C1S8 567 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 PDE4AP27815 886 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 ACTR2P61160 394 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 PDE12Q6L8Q7 609 aaKnown RBP21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 CHD1LQ86WJ1 897 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 KIAA0319LQ8IZA0 1049 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 CMTR1Q8N1G2 835 aaKnown RBP21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 RRP36Q96EU6 259 aaKnown RBP21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 PPP1R16BQ96T49 567 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 ST3GAL5Q9UNP4 418 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 LZTS1Q9Y250 596 aa21.79■■□□□ 1.08
HMGCS1-206ENST00000511774 NCOR2Q9Y618 2525 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 hCG_1642624A0A1W2PR95 340 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 FSD2A1L4K1 749 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 HIP1O00291 1037 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 RPS6KA5O75582 802 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 PLCB3Q01970 1234 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 MTMR3Q13615 1198 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 COL9A3Q14050 684 aaPredicted RBP21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 KANK3Q6NY19 840 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 SLC24A5Q71RS6 500 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 PSTPIP2Q9H939 334 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 ENTPD7Q9NQZ7 604 aa21.78■■□□□ 1.08
HMGCS1-206ENST00000511774 DENND3A2RUS2 1198 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 KLRC1P26715 233 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 STAT5BP51692 787 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 FAM189BP81408 668 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 TRDNQ13061 729 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 ITGB3BPQ13352 177 aaPredicted RBP21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 DSC3Q14574 896 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 PLPPR4Q7Z2D5 763 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 CATIPQ7Z7H3 387 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 FAM228AQ86W67 206 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 UBALD2Q8IYN6 164 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 NME8Q8N427 588 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 CASD1Q96PB1 797 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 AZI2Q9H6S1 392 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 KCNH7Q9NS40 1196 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 PCDHA6Q9UN73 950 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 PCDHA8Q9Y5H6 950 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 HCFC2Q9Y5Z7 792 aa21.77■■□□□ 1.08
HMGCS1-206ENST00000511774 CEP250Q9BV73 2442 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 ERICH2A1L162 156 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 ZBTB42B2RXF5 422 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 E7EWF7 191 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 IGHDP01880 384 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 HOXB8P17481 243 aaPredicted RBP21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 LAG3P18627 525 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 NUCB1Q02818 461 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 ASTLQ6HA08 431 aaPredicted RBP21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 ZNF654Q8IZM8 581 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 C1orf112Q9NSG2 853 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 TMEM161AQ9NX61 479 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 NR2E1Q9Y466 385 aa21.76■■□□□ 1.07
HMGCS1-206ENST00000511774 DENND4AQ7Z401 1863 aa21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 SRGAP2BP0DMP2 458 aa21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 CWF19L1Q69YN2 538 aaKnown RBP21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 KCNT2Q6UVM3 1135 aa21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 MB21D2Q8IYB1 491 aaPredicted RBP21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 ADSSL1Q8N142 457 aa21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 C12orf76Q8N812 135 aaPredicted RBP21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 ADAM7Q9H2U9 754 aa21.75■■□□□ 1.07
HMGCS1-206ENST00000511774 IGKV6D-21A0A0A0MT36 114 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 C2orf71A6NGG8 1288 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 ATG7O95352 703 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 CCNE2O96020 404 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 RXRAP19793 462 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 ID4P47928 161 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 KIZQ2M2Z5 673 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 ERMP1Q7Z2K6 904 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 NKD2Q969F2 451 aaPredicted RBP21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 OSMRQ99650 979 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 MXRA8Q9BRK3 442 aa21.74■■□□□ 1.07
HMGCS1-206ENST00000511774 ATP6V0A4Q9HBG4 840 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms