RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TMEFF2Q9UIK5 374 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 MRPS23Q9Y3D9 190 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 NPFFR2Q9Y5X5 522 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 CDC42BPAQ5VT25 1732 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 KIAA1210Q9ULL0 1709 aa5.16□□□□□ -1.58
TOPBP1-208ENST00000511439 ESYT3A0FGR9 886 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 C22orf46C9J442 243 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 MYO1BO43795 1136 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 PLATP00750 562 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 HSPA1AP0DMV8 641 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 HSPA1BP0DMV9 641 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 SUMO1P63165 101 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 PUM1Q14671 1186 aaKnown RBP eCLIP5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 CHRNA2Q15822 529 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 NTRK3Q16288 839 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 RGL3Q3MIN7 710 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 MBLAC2Q68D91 279 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 CD300LDQ6UXZ3 194 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 PPIL6Q8IXY8 311 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 IPO9Q96P70 1041 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 SIT1Q9Y3P8 196 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 TIMM13Q9Y5L4 95 aaPredicted RBP5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 PLEKHG1Q9ULL1 1385 aa5.15□□□□□ -1.59
TOPBP1-208ENST00000511439 FYCO1Q9BQS8 1478 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 MROH6A6NGR9 719 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 ENPP3O14638 875 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 MEFVO15553 781 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 SGSM2O43147 1006 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 C6orf222P0C671 652 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 LTBRP36941 435 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 ADAM17P78536 824 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 KCNAB2Q13303 367 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 SURF1Q15526 300 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 INF2Q27J81 1249 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 RSPO2Q6UXX9 243 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 MILR1Q7Z6M3 343 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 HOMER1Q86YM7 354 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 TEX2Q8IWB9 1127 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 FAM126BQ8IXS8 530 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 Q8N1Y9 231 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 APPBP2Q92624 585 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 DPF3Q92784 378 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 DIO2Q92813 273 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 RBM15Q96T37 977 aaKnown RBP eCLIP5.14□□□□□ -1.598e-8■■□□□ 13.7
TOPBP1-208ENST00000511439 YIPF4Q9BSR8 244 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 FANCLQ9NW38 375 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 BTG4Q9NY30 223 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 COA3Q9Y2R0 106 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 CROCC2H7BZ55 1655 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 PIK3R4Q99570 1358 aa5.14□□□□□ -1.59
TOPBP1-208ENST00000511439 TRPM2O94759 1503 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 PTPN23Q9H3S7 1636 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 BLACEA4D250 179 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 CYP7B1O75881 506 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 NKX3-2P78367 333 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 CPZQ66K79 652 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 SDE2Q6IQ49 451 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 STYK1Q6J9G0 422 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 USP53Q70EK8 1073 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 PLEKHH3Q7Z736 793 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 RCBTB1Q8NDN9 531 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 DCAF4Q8WV16 495 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 TRMT2BQ96GJ1 504 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 LCORQ96JN0 433 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 C1QTNF3Q9BXJ4 246 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 GPR27Q9NS67 375 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 X6R8D5 127 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 ADCY9O60503 1353 aa5.13□□□□□ -1.59
TOPBP1-208ENST00000511439 USP32Q8NFA0 1604 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 C1QTNF3-AMACRE9PGA6 284 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 LCP1P13796 627 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 ITGA1P56199 1179 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 GABREP78334 506 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 TBC1D10BQ4KMP7 808 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 TRIM61Q5EBN2 209 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 KCNT2Q6UVM3 1135 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 GLB1LQ6UWU2 654 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 MAMDC2Q7Z304 686 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 SYNPOQ8N3V7 929 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 PTPRN2Q92932 1015 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 TMEM169Q96HH4 297 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 LOXL4Q96JB6 756 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 WRNIP1Q96S55 665 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 ZFYVE21Q9BQ24 234 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 MRPL4Q9BYD3 311 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 NCOA5Q9HCD5 579 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 ZNF652Q9Y2D9 606 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 NOS1P29475 1434 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 EHBP1L1Q8N3D4 1523 aa5.12□□□□□ -1.59
TOPBP1-208ENST00000511439 NWD2Q9ULI1 1742 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 GOLGB1Q14789 3259 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 H7BY64 318 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 PLD2O14939 933 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 PPP1R12AO14974 1030 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 CDC45O75419 566 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 TOMM70O94826 608 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 PRR31Q5SQ13 230 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 MCTP2Q6DN12 878 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms