RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 IPPQ9Y573 584 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
POLR2J3-215ENST00000511313 ARVCFO00192 962 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 NDC80O14777 642 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 TNNI1P19237 187 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 HOXA13P31271 388 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 UBE2HP62256 183 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 ITGA7Q13683 1181 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 CYP4A22Q5TCH4 519 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 ZBED3Q96IU2 234 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 NLRP4Q96MN2 994 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 THG1LQ9NWX6 298 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 GRB14Q14449 540 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 MYOCDQ8IZQ8 938 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 ARHGAP18Q8N392 663 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 OTUD7AQ8TE49 926 aaPredicted RBP10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 PRIMPOLQ96LW4 560 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 ENTPD7Q9NQZ7 604 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 LSM7Q9UK45 103 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 SREBF1P36956 1147 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 SDE2Q6IQ49 451 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 C17orf99Q6UX52 265 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 CYFIP1Q7L576 1253 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 PPTC7Q8NI37 304 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 TRPV6Q9H1D0 765 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 STRIP2Q9ULQ0 834 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 HPS5Q9UPZ3 1129 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 SCN7AQ01118 1682 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 F13A1P00488 732 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 PCSK1P29120 753 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 ACTN2P35609 894 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 SMARCB1Q12824 385 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 STX1AQ16623 288 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 POMGNT1Q8WZA1 660 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 RNF34Q969K3 372 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 MAML3Q96JK9 1138 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 APOL6Q9BWW8 343 aa10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 DDX4Q9NQI0 724 aaKnown RBP10.59□□□□□ -0.71
POLR2J3-215ENST00000511313 NDUFAF2Q8N183 169 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 STKLD1Q8NE28 680 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 AGBL1Q96MI9 1066 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 MYL10Q9BUA6 226 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 CLDN3O15551 220 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 PPP6R2O75170 966 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 LRG1P02750 347 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 CNKSR3Q6P9H4 555 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 C4orf50Q6ZRC1 276 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 LMBR1Q8WVP7 490 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 LARP4BQ92615 738 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 ACAP3Q96P50 834 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 CDK5RAP1Q96SZ6 601 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 A1CFQ9NQ94 594 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 NEDD4P46934 1319 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 TCRBV5S4A2TA0A5A2 114 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 TLL1O43897 1013 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 KRT19P08727 400 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 ZMYND12Q9H0C1 365 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 CYP39A1Q9NYL5 469 aa10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 PIN4Q9Y237 131 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-215ENST00000511313 TCF7P36402 384 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 RPL10AP62906 217 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 PTH1RQ03431 593 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 BIRC2Q13490 618 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 CELF3Q5SZQ8 465 aaKnown RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 ZNF589Q86UQ0 364 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 DHX58Q96C10 678 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 EYA4O95677 639 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 GAS8O95995 478 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 IGFBP4P22692 258 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 MARK3P27448 753 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 NNMTP40261 264 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 FAM26FQ5R3K3 315 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 FERMT3Q86UX7 667 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 AFG1LQ8WV93 481 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 TNIP3Q96KP6 325 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 POLR3CQ9BUI4 534 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 KDM3BQ7LBC6 1761 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 SV2CQ496J9 727 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 EFHBQ8N7U6 833 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 UBE2Q2Q8WVN8 375 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 TAF4BQ92750 862 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 SKA1Q96BD8 255 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 ZNF830Q96NB3 372 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 TAAR1Q96RJ0 339 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 PASKQ96RG2 1323 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 ALDH2P05091 517 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 PPM1FP49593 454 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 GABPAQ06546 454 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 ZNF568Q3ZCX4 644 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 PADI6Q6TGC4 694 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 FAM43AQ8N2R8 423 aa10.57□□□□□ -0.72
POLR2J3-215ENST00000511313 PHOSPHO2Q8TCD6 241 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms