RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 GUCD1Q96NT3 240 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 C2orf49Q9BVC5 232 aaPredicted RBP9.89□□□□□ -0.83
PDPN-209ENST00000510906 BCAS3Q9H6U6 928 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 IL23AQ9NPF7 189 aa9.89□□□□□ -0.83
PDPN-209ENST00000510906 CNTNAP5Q8WYK1 1306 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 KLF18A0A0U1RQI7 1052 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 CDK2AP1O14519 115 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 ZBTB43O43298 467 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 ZIC2O95409 532 aaPredicted RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 ZNF286BP0CG31 522 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 NPR3P17342 541 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PTGIRP43119 386 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PSMA6P60900 246 aaKnown RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 PRR20EP86478 221 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PRR20CP86479 221 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PRR20DP86480 221 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PRR20BP86481 221 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PRR20AP86496 221 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PTPN11Q06124 597 aaPredicted RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 DGKDQ16760 1214 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 UBE2SQ16763 222 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 RTN1Q16799 776 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 HSDL1Q3SXM5 330 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 CELF3Q5SZQ8 465 aaKnown RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 RASIP1Q5U651 963 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PSRC1Q6PGN9 363 aaPredicted RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 HEATR3Q7Z4Q2 680 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PPTC7Q8NI37 304 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 KCNB2Q92953 911 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 CUL5Q93034 780 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 SPATA33Q96N06 139 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 JAKMIP1Q96N16 626 aaKnown RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 INPP4AQ96PE3 977 aaPredicted RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 TTYH1Q9H313 450 aaPredicted RBP9.88□□□□□ -0.83
PDPN-209ENST00000510906 ZFAND3Q9H8U3 227 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 PSTPIP2Q9H939 334 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 RTEL1Q9NZ71 1219 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 SNX14Q9Y5W7 946 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 USP3Q9Y6I4 520 aa9.88□□□□□ -0.83
PDPN-209ENST00000510906 SCN10AQ9Y5Y9 1956 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.87□□□□□ -0.83
PDPN-209ENST00000510906 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.87□□□□□ -0.83
PDPN-209ENST00000510906 GOLGA8AA7E2F4 631 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 GOLGA8BA8MQT2 603 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 GRXCR1A8MXD5 290 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 F2P00734 622 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 FGBP02675 491 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 TGFB3P10600 412 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 HOXD8P13378 290 aaPredicted RBP9.87□□□□□ -0.83
PDPN-209ENST00000510906 ICAM3P32942 547 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 HSPA4P34932 840 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 WDR4P57081 412 aaKnown RBP9.87□□□□□ -0.83
PDPN-209ENST00000510906 TLR1Q15399 786 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 WWC2Q6AWC2 1192 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 GDF6Q6KF10 455 aaPredicted RBP9.87□□□□□ -0.83
PDPN-209ENST00000510906 KCNV1Q6PIU1 500 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 OTOP2Q7RTS6 562 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 GLYCTKQ8IVS8 523 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 HERVK_113Q902F9 699 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 CTAGE1Q96RT6 745 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 ALG1Q9BT22 464 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 SEMA6BQ9H3T3 888 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 MLXIPQ9HAP2 919 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 RBM28Q9NW13 759 aaKnown RBP9.87□□□□□ -0.83
PDPN-209ENST00000510906 MYH6P13533 1939 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 PIEZO1Q92508 2521 aa9.87□□□□□ -0.83
PDPN-209ENST00000510906 SPATA31C2B4DYI2 1134 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 RBAK-RBAKDNI3L0D1 243 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 HAS3O00219 553 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 FIBPO43427 364 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 PPFIA4O75335 1185 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 STAM2O75886 525 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 HMGB1P09429 215 aaKnown RBP9.86□□□□□ -0.83
PDPN-209ENST00000510906 CDC27P30260 824 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 MARSP56192 900 aaKnown RBP9.86□□□□□ -0.83
PDPN-209ENST00000510906 ARHGAP4P98171 946 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 FGD1P98174 961 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 APOBRQ0VD83 1088 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 PTGISQ16647 500 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 KIAA0753Q2KHM9 967 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 GNPTABQ3T906 1256 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 PCNX4Q63HM2 1172 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 DEFB128Q7Z7B8 93 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 SESTD1Q86VW0 696 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 CYP4X1Q8N118 509 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 C7orf31Q8N865 590 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 DHX38Q92620 1227 aaKnown RBP9.86□□□□□ -0.83
PDPN-209ENST00000510906 HDAC6Q9UBN7 1215 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 GTF2IRD1Q9UHL9 959 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 NAP1L2Q9ULW6 460 aaPredicted RBP9.86□□□□□ -0.83
PDPN-209ENST00000510906 STXBP5LQ9Y2K9 1186 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 TELO2Q9Y4R8 837 aa9.86□□□□□ -0.83
PDPN-209ENST00000510906 TTC24A2A3L6 582 aaPredicted RBP9.85□□□□□ -0.83
PDPN-209ENST00000510906 REC8O95072 547 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 IQCF3P0C7M6 154 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 NAPAP54920 295 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 ZNF200P98182 395 aaPredicted RBP9.85□□□□□ -0.83
PDPN-209ENST00000510906 SP4Q02446 784 aa9.85□□□□□ -0.83
PDPN-209ENST00000510906 MTMR3Q13615 1198 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms