RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	ARHGEF3	Q9NR81	526 aa		12.55	□□□□□ -0.4
PTCD2-208	ENST00000510676	ZNF215	Q9UL58	517 aa	Predicted RBP	12.55	□□□□□ -0.4
PTCD2-208	ENST00000510676	LRFN2	Q9ULH4	789 aa		12.55	□□□□□ -0.4
PTCD2-208	ENST00000510676	ABCB11	O95342	1321 aa		12.55	□□□□□ -0.4
PTCD2-208	ENST00000510676	IGSF9B	Q9UPX0	1349 aa		12.55	□□□□□ -0.4
PTCD2-208	ENST00000510676	TSPY2	A6NKD2	308 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	TBKBP1	A7MCY6	615 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	TOP1	P11387	765 aa	Known RBP	12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	STARD6	P59095	220 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	PPARA	Q07869	468 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	FAM102B	Q5T8I3	360 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	METTL7B	Q6UX53	244 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	SLC44A3	Q8N4M1	653 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	FEZF2	Q8TBJ5	459 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	DNAJB3	Q8WWF6	145 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	APPBP2	Q92624	585 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	NXPE3	Q969Y0	559 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	CLUAP1	Q96AJ1	413 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	BCAS3	Q9H6U6	928 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	GMEB2	Q9UKD1	530 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	PCDHB7	Q9Y5E2	793 aa		12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.54	□□□□□ -0.4
PTCD2-208	ENST00000510676	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	NOP56	O00567	594 aa	Known RBP	12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	LAMTOR5	O43504	91 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	N4BP1	O75113	896 aa	Known RBP	12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	PDE4A	P27815	886 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	HSD17B4	P51659	736 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	CLCN6	P51797	869 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	KRT17	Q04695	432 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	MARCH8	Q5T0T0	291 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	UNQ6494/PRO21346	Q6UXR6	183 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	STOX1	Q6ZVD7	989 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	FAM9B	Q8IZU0	186 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	GPR152	Q8TDT2	470 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	SLC22A17	Q8WUG5	538 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	KIF1BP	Q96EK5	621 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	TMEM47	Q9BQJ4	181 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	SLC2A4RG	Q9NR83	387 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	EPS15L1	Q9UBC2	864 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	TUBE1	Q9UJT0	475 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	IRAK3	Q9Y616	596 aa		12.53	□□□□□ -0.4
PTCD2-208	ENST00000510676	TENM4	Q6N022	2769 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	C1QTNF9B	B2RNN3	333 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	TAF4	O00268	1085 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	TM4SF5	O14894	197 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	APP	P05067	770 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	C1QTNF9	P0C862	333 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	SPEM2	Q0P670	501 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	PAK2	Q13177	524 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	LETM2	Q2VYF4	491 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	IER5	Q5VY09	327 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	DCLRE1A	Q6PJP8	1040 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	KCNT2	Q6UVM3	1135 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	TMC5	Q6UXY8	1006 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	ZNF579	Q8NAF0	562 aa	Known RBP	12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	RSAD2	Q8WXG1	361 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	DDX23	Q9BUQ8	820 aa	Known RBP	12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	NACAP1	Q9BZK3	213 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	FOXQ1	Q9C009	403 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	PATJ	Q8NI35	1801 aa		12.52	□□□□□ -0.41
PTCD2-208	ENST00000510676	TMEM8B	A6NDV4	472 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676		C9IYK1	514 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	MGEA5	O60502	916 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	LRRN2	O75325	713 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	FGR	P09769	529 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	EPCAM	P16422	314 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	CSTF1	Q05048	431 aa	Known RBP	12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	RING1	Q06587	406 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	LAIR1	Q6GTX8	287 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	C15orf39	Q6ZRI6	1047 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	LRRC55	Q6ZSA7	311 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	IL31RA	Q8NI17	732 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	GLG1	Q92896	1179 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	FAM126A	Q9BYI3	521 aa	Predicted RBP	12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	BCO2	Q9BYV7	579 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	OSBPL6	Q9BZF3	934 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	SFXN1	Q9H9B4	322 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	RGS18	Q9NS28	235 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	C1orf112	Q9NSG2	853 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	SPATA6	Q9NWH7	488 aa	Predicted RBP	12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	SPG21	Q9NZD8	308 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	KDM3A	Q9Y4C1	1321 aa		12.51	□□□□□ -0.41
PTCD2-208	ENST00000510676	KAT6A	Q92794	2004 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676		M0R2C6	588 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	OPLAH	O14841	1288 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	ORC4	O43929	436 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	FOXD2	O60548	495 aa	Predicted RBP	12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	RET	P07949	1114 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	MYCL	P12524	364 aa	Predicted RBP	12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	MAGEA9	P43362	315 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	FAM189B	P81408	668 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	PPFIA1	Q13136	1202 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	NEDD9	Q14511	834 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	PGM5	Q15124	567 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	GRIK4	Q16099	956 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	CSRP2	Q16527	193 aa		12.5	□□□□□ -0.41
PTCD2-208	ENST00000510676	CDC37	Q16543	378 aa	Predicted RBP	12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms