RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PPFIA3O75145 1194 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 ADCY7P51828 1080 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 ERVFC1P60507 584 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 NFX1Q12986 1120 aaKnown RBP18.15■□□□□ 0.5
RAB40C-202ENST00000509637 PAK2Q13177 524 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 SMAD4Q13485 552 aaKnown RBP18.15■□□□□ 0.5
RAB40C-202ENST00000509637 PKN1Q16512 942 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 RTN1Q16799 776 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 ATP8B4Q8TF62 1192 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 FBXL18Q96ME1 805 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 BARX2Q9UMQ3 279 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-202ENST00000509637 PER2O15055 1255 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 NCK2O43639 380 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 NRIP1P48552 1158 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 SARSP49591 514 aaKnown RBP18.14■□□□□ 0.49
RAB40C-202ENST00000509637 DSC3Q14574 896 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 TSGA10IPQ3SY00 556 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 HERC4Q5GLZ8 1057 aaPredicted RBP18.14■□□□□ 0.49
RAB40C-202ENST00000509637 SWSAP1Q6NVH7 229 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.49
RAB40C-202ENST00000509637 FAM228AQ86W67 206 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 PLA2G4DQ86XP0 818 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 EFHBQ8N7U6 833 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 ADAM2Q99965 735 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 FTHL17Q9BXU8 183 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 CWH43Q9H720 699 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 ST3GAL5Q9UNP4 418 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 GINS2Q9Y248 185 aa18.14■□□□□ 0.49
RAB40C-202ENST00000509637 ZBTB43O43298 467 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 HBP1O60381 514 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 GPR32O75388 356 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 C22orf31O95567 290 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 FOSP01100 380 aaPredicted RBP18.13■□□□□ 0.49
RAB40C-202ENST00000509637 FAM189BP81408 668 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 PPP1R18Q6NYC8 613 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 LRRC55Q6ZSA7 311 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 NME8Q8N427 588 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 SMRP1Q8NCR6 262 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 RGS18Q9NS28 235 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 RBM28Q9NW13 759 aaKnown RBP18.13■□□□□ 0.49
RAB40C-202ENST00000509637 WDR81Q562E7 1941 aa18.13■□□□□ 0.49
RAB40C-202ENST00000509637 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 GOLGA8AA7E2F4 631 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 GOLGA8BA8MQT2 603 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 VTNP04004 478 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 CYP3A4P08684 503 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 FGFR1P11362 822 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 NHLH1Q02575 133 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 KIZQ2M2Z5 673 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 NAALADL2Q58DX5 795 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 NIPA1Q7RTP0 329 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 TRMT1LQ7Z2T5 733 aaKnown RBP18.12■□□□□ 0.49
RAB40C-202ENST00000509637 LINC01465Q8N7H1 131 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 LENG9Q96B70 501 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 PHOX2BQ99453 314 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 OSMRQ99650 979 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 ZNF302Q9NR11 478 aa18.12■□□□□ 0.49
RAB40C-202ENST00000509637 TYW1Q9NV66 732 aaKnown RBP18.12■□□□□ 0.49
RAB40C-202ENST00000509637 MAFBQ9Y5Q3 323 aaPredicted RBP18.12■□□□□ 0.49
RAB40C-202ENST00000509637 PIEZO1Q92508 2521 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 TBKBP1A7MCY6 615 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 LOC730098B7Z3J9 87 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 FSCN2O14926 492 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 ZNF862O60290 1169 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 RPS6KA5O75582 802 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 STAG3L1P0CL83 205 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 NDUFV1P49821 464 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 APOBRQ0VD83 1088 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 COASYQ13057 564 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 AP3B2Q13367 1082 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 KCNC3Q14003 757 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 PFKFB3Q16875 520 aaPredicted RBP18.11■□□□□ 0.49
RAB40C-202ENST00000509637 IER5LQ5T953 404 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 PDXDC2PQ6P474 469 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 ZNF668Q96K58 619 aaPredicted RBP18.11■□□□□ 0.49
RAB40C-202ENST00000509637 CDH22Q9UJ99 828 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 FAM50BQ9Y247 325 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 USP15Q9Y4E8 981 aaPredicted RBP18.11■□□□□ 0.49
RAB40C-202ENST00000509637 WDFY4Q6ZS81 3184 aa18.11■□□□□ 0.49
RAB40C-202ENST00000509637 M0QZ92 97 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 IPO5O00410 1097 aaKnown RBP18.1■□□□□ 0.49
RAB40C-202ENST00000509637 BACH1O14867 736 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 ZNF484Q5JVG2 852 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 SYNE3Q6ZMZ3 975 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 COLGALT1Q8NBJ5 622 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 KCNB2Q92953 911 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 GJA10Q969M2 543 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 ADAMTS10Q9H324 1103 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 PCDHB7Q9Y5E2 793 aa18.1■□□□□ 0.49
RAB40C-202ENST00000509637 MYH9P35579 1960 aaKnown RBP18.1■□□□□ 0.49
RAB40C-202ENST00000509637 COL1A2P08123 1366 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 FGF18O76093 207 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 RPLP2P05387 115 aaKnown RBP18.09■□□□□ 0.49
RAB40C-202ENST00000509637 ZNF76P36508 570 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 PBX3P40426 434 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 SLC26A2P50443 739 aa18.09■□□□□ 0.49
RAB40C-202ENST00000509637 CLCN3P51790 818 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms