RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 BMP15O95972 392 aa22.6■■□□□ 1.21
HOXC6-204ENST00000509328 ACRP10323 421 aa22.6■■□□□ 1.21
HOXC6-204ENST00000509328 FAM26DQ5JW98 314 aa22.6■■□□□ 1.21
HOXC6-204ENST00000509328 DTHD1Q6ZMT9 781 aa22.6■■□□□ 1.21
HOXC6-204ENST00000509328 ANO5Q75V66 913 aa22.6■■□□□ 1.21
HOXC6-204ENST00000509328 DEFB128Q7Z7B8 93 aa22.6■■□□□ 1.21
HOXC6-204ENST00000509328 FAM49AQ9H0Q0 323 aaPredicted RBP22.6■■□□□ 1.21
HOXC6-204ENST00000509328 LYPLA2O95372 231 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 CTSHP09668 335 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 SHHQ15465 462 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 MTERF2Q49AM1 385 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 TMEM240Q5SV17 173 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 C9orf50Q5SZB4 431 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 ARL6IP4Q66PJ3 421 aaKnown RBP22.59■■□□□ 1.21
HOXC6-204ENST00000509328 ZNF365Q70YC5 407 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 NME8Q8N427 588 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 IGSF22Q8N9C0 903 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 VWCEQ96DN2 955 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.59■■□□□ 1.21
HOXC6-204ENST00000509328 TUFT1Q9NNX1 390 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 LRWD1Q9UFC0 647 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 STK24Q9Y6E0 443 aa22.59■■□□□ 1.21
HOXC6-204ENST00000509328 TMEM150BA6NC51 233 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 NBNO60934 754 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 FGBP02675 491 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 YWHABP31946 246 aaKnown RBP22.58■■□□□ 1.21
HOXC6-204ENST00000509328 MRPS6P82932 125 aaKnown RBP22.58■■□□□ 1.21
HOXC6-204ENST00000509328 TBC1D8BQ0IIM8 1120 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 GPNMBQ14956 572 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 SF3A1Q15459 793 aaKnown RBP22.58■■□□□ 1.21
HOXC6-204ENST00000509328 HAUS3Q68CZ6 603 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 OTUD6AQ7L8S5 288 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 METTL13Q8N6R0 699 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 CEP89Q96ST8 783 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 POLR3CQ9BUI4 534 aaPredicted RBP22.58■■□□□ 1.21
HOXC6-204ENST00000509328 FTOQ9C0B1 505 aaKnown RBP eCLIP22.58■■□□□ 1.21
HOXC6-204ENST00000509328 PPME1Q9Y570 386 aa22.58■■□□□ 1.21
HOXC6-204ENST00000509328 M0QZ92 97 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 CHRNA1P02708 482 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 CXCL10P02778 98 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 SPATA31C1P0DKV0 1188 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 ZSCAN22P10073 491 aaPredicted RBP22.57■■□□□ 1.2
HOXC6-204ENST00000509328 RPA1P27694 616 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 MGAT3Q09327 533 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 MBTPS1Q14703 1052 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 IL17AQ16552 155 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 IER5Q5VY09 327 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 PLA2G4FQ68DD2 849 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 EFCAB12Q6NXP0 572 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 CATSPER3Q86XQ3 398 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 KIAA0319LQ8IZA0 1049 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 CYP26B1Q9NR63 512 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 TRIOBPQ9H2D6 2365 aa22.57■■□□□ 1.2
HOXC6-204ENST00000509328 RANBP2P49792 3224 aaKnown RBP22.57■■□□□ 1.2
HOXC6-204ENST00000509328 MED24O75448 989 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 TMOD1P28289 359 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 HABP4Q5JVS0 413 aaKnown RBP22.56■■□□□ 1.2
HOXC6-204ENST00000509328 FAM173BQ6P4H8 233 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 LINC01465Q8N7H1 131 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 HERVK_113Q902F9 699 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 CEP170P1Q96L14 293 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 RNPC3Q96LT9 517 aaKnown RBP22.56■■□□□ 1.2
HOXC6-204ENST00000509328 SH2D3AQ9BRG2 576 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 CDY2AQ9Y6F7 541 aa22.56■■□□□ 1.2
HOXC6-204ENST00000509328 ACTN1P12814 892 aa22.55■■□□□ 1.2
HOXC6-204ENST00000509328 XRCC6P12956 609 aaKnown RBP eCLIP22.55■■□□□ 1.2
HOXC6-204ENST00000509328 MUTP22033 750 aa22.55■■□□□ 1.2
HOXC6-204ENST00000509328 NPEPPSP55786 919 aa22.55■■□□□ 1.2
HOXC6-204ENST00000509328 EXOC8Q8IYI6 725 aa22.55■■□□□ 1.2
HOXC6-204ENST00000509328 JPH2Q9BR39 696 aaPredicted RBP22.55■■□□□ 1.2
HOXC6-204ENST00000509328 MTIF3Q9H2K0 278 aaKnown RBP22.55■■□□□ 1.2
HOXC6-204ENST00000509328 ANKEF1Q9NU02 776 aa22.55■■□□□ 1.2
HOXC6-204ENST00000509328 TRPV2Q9Y5S1 764 aa22.55■■□□□ 1.2
HOXC6-204ENST00000509328 CLIC4Q9Y696 253 aa22.55■■□□□ 1.2
HOXC6-204ENST00000509328 IGKV6-21A0A0C4DH24 114 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 VWA3AA6NCI4 1184 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 ZBTB39O15060 712 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 MAFO75444 373 aaPredicted RBP22.54■■□□□ 1.2
HOXC6-204ENST00000509328 F13A1P00488 732 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 CCT6AP40227 531 aaKnown RBP22.54■■□□□ 1.2
HOXC6-204ENST00000509328 RFC5P40937 340 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 CLCN3P51790 818 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 TMEM62Q0P6H9 643 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 XKR9Q5GH70 373 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 CNKSR3Q6P9H4 555 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 OTOP2Q7RTS6 562 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 LRRC71Q8N4P6 559 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 MAP7D2Q96T17 732 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 CELF4Q9BZC1 486 aaKnown RBP22.54■■□□□ 1.2
HOXC6-204ENST00000509328 SUGCTQ9HAC7 445 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 KDM3AQ9Y4C1 1321 aa22.54■■□□□ 1.2
HOXC6-204ENST00000509328 MICAL3Q7RTP6 2002 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 DNM2P50570 870 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 PKP1Q13835 747 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 PTPAQ15257 358 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 RASIP1Q5U651 963 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 FOXD4L5Q5VV16 416 aaPredicted RBP22.53■■□□□ 1.2
HOXC6-204ENST00000509328 KRT79Q5XKE5 535 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 ZNF710Q8N1W2 664 aa22.53■■□□□ 1.2
HOXC6-204ENST00000509328 ZNF579Q8NAF0 562 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms