RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 HSFX1Q9UBD0 423 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 PACSIN2Q9UNF0 486 aaPredicted RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 C1orf167Q5SNV9 1468 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 AFDNP55196 1824 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 POLD1P28340 1107 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 PLOD1Q02809 727 aaPredicted RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 CCDC6Q16204 474 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 CSGALNACT2Q8N6G5 542 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 NGDNQ8NEJ9 315 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 PPP2R3CQ969Q6 453 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 NAP1L3Q99457 506 aaPredicted RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 ZMYND12Q9H0C1 365 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 BRD8Q9H0E9 1235 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 PABPC3Q9H361 631 aaKnown RBP10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 LY9Q9HBG7 655 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 ETNK2Q9NVF9 386 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 IL1RAPL1Q9NZN1 696 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 CHMP2BQ9UQN3 213 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 DAAM1Q9Y4D1 1078 aa10.85□□□□□ -0.67
PDGFRA-207ENST00000509092 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 A0A0J9YVX5 310 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 TLDC2A0PJX2 215 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 PGRMC1O00264 195 aaKnown RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 KCNK3O14649 394 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 KCNQ3O43525 872 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 IGKV5-2P06315 115 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 MGAT5Q09328 741 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 MKRN3Q13064 507 aaKnown RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 RPS6KA1Q15418 735 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 ZC2HC1CQ53FD0 456 aaPredicted RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 TNFAIP8L3Q5GJ75 292 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 SNX30Q5VWJ9 437 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 DAB2IPQ5VWQ8 1189 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 INTS8Q75QN2 995 aaKnown RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 TMC4Q7Z404 712 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 PROCA1Q8NCQ7 364 aaPredicted RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 CLMNQ96JQ2 1002 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 CATSPER2Q96P56 530 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 ORAI2Q96SN7 254 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 DUSP9Q99956 384 aaKnown RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 TMEM109Q9BVC6 243 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 OXCT2Q9BYC2 517 aaPredicted RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 DDX47Q9H0S4 455 aaKnown RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 DDX21Q9NR30 783 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 UTP11Q9Y3A2 253 aaKnown RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 LRRC53A6NM62 1247 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 DEXIO95424 95 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 EYA4O95677 639 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 HNRNPCP07910 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 ZFYP08048 801 aaPredicted RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 IFIT1P09914 478 aaKnown RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 CCNFP41002 786 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 HPCAP84074 193 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 P3H1Q32P28 736 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 USH1GQ495M9 461 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 IGDCC4Q8TDY8 1250 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 WDR60Q8WVS4 1066 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 MTA3Q9BTC8 594 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 MYL10Q9BUA6 226 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 DENND2DQ9H6A0 471 aaPredicted RBP10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 SIK3Q9Y2K2 1263 aa10.84□□□□□ -0.67
PDGFRA-207ENST00000509092 USP6P35125 1406 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 RAD21O60216 631 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 LYNP07948 512 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 PSMD7P51665 324 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 PMS2P54278 862 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 KLC3Q6P597 504 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 RRAGAQ7L523 313 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 ECHDC2Q86YB7 292 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 SLF2Q8IX21 1173 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 RSPH1Q8WYR4 309 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 SMC6Q96SB8 1091 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 TBC1D10AQ9BXI6 508 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 AP1M1Q9BXS5 423 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 DHX36Q9H2U1 1008 aaKnown RBP10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 TMOD4Q9NZQ9 345 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 SEC63Q9UGP8 760 aaKnown RBP10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 DENND2AQ9ULE3 1009 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 NOC2LQ9Y3T9 749 aaKnown RBP10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 LMO7Q8WWI1 1683 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 NEURL1BA8MQ27 555 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 EPHB6O15197 1021 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 TTI1O43156 1089 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 ENTPD5O75356 428 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 CDK7P50613 346 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 OXCT1P55809 520 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 SESN3P58005 492 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 RTP1P59025 263 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 SLC39A6Q13433 755 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 GCKRQ14397 625 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 HLFQ16534 295 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 TBC1D9BQ66K14 1250 aa10.83□□□□□ -0.68
PDGFRA-207ENST00000509092 PDXDC1Q6P996 788 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms