RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 NBPF6Q5VWK0 638 aa6.81□□□□□ -1.32
LINC01088-205ENST00000509088 TRIM68Q6AZZ1 485 aa6.81□□□□□ -1.32
LINC01088-205ENST00000509088 CXXC5Q7LFL8 322 aaKnown RBP6.81□□□□□ -1.32
LINC01088-205ENST00000509088 CACTINQ8WUQ7 758 aaKnown RBP6.81□□□□□ -1.32
LINC01088-205ENST00000509088 NBPF4Q96M43 638 aa6.81□□□□□ -1.32
LINC01088-205ENST00000509088 CATSPERZQ9NTU4 200 aa6.81□□□□□ -1.32
LINC01088-205ENST00000509088 TRBV23-1A0A0A0MS06 115 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 FAM221BA6H8Z2 402 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 PDPK1O15530 556 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 DIAPH1O60610 1272 aaKnown RBP6.8□□□□□ -1.32
LINC01088-205ENST00000509088 KRT15P19012 456 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 HERVK_113P62684 666 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 BMS1Q14692 1282 aaKnown RBP6.8□□□□□ -1.32
LINC01088-205ENST00000509088 SOGA3Q5TF21 947 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 NOSTRINQ8IVI9 506 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 GPR135Q8IZ08 494 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 TRIM55Q9BYV6 548 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 ZSWIM4Q9H7M6 989 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 CDC42EP3Q9UKI2 254 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 PCDHA9Q9Y5H5 950 aa6.8□□□□□ -1.32
LINC01088-205ENST00000509088 CLASP2O75122 1294 aaKnown RBP6.79□□□□□ -1.32
LINC01088-205ENST00000509088 ACRV1P26436 265 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 SUMO1P63165 101 aaKnown RBP6.79□□□□□ -1.32
LINC01088-205ENST00000509088 LACTBP83111 547 aaPredicted RBP6.79□□□□□ -1.32
LINC01088-205ENST00000509088 CD83Q01151 205 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 GUCY1A3Q02108 690 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 HGFACQ04756 655 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 RASGRF1Q13972 1273 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 PCOLCEQ15113 449 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 FNDC7Q5VTL7 733 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
LINC01088-205ENST00000509088 BTBD2Q9BX70 525 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 SIRPGQ9P1W8 387 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 PFDN2Q9UHV9 154 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 FBXO10Q9UK96 956 aa6.79□□□□□ -1.32
LINC01088-205ENST00000509088 CCDC66A2RUB6 948 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 PRAMEF25A6NGN4 478 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 CCDC85CA6NKD9 419 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 SRGAP2CP0DJJ0 459 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 ABHD18Q0P651 414 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 RASA3Q14644 834 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 LSM12Q3MHD2 195 aaKnown RBP6.78□□□□□ -1.32
LINC01088-205ENST00000509088 USP30Q70CQ3 517 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 AMER2Q8N7J2 671 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 UCKL1Q9NWZ5 548 aa6.78□□□□□ -1.32
LINC01088-205ENST00000509088 CDK11AQ9UQ88 783 aaPredicted RBP6.78□□□□□ -1.32
LINC01088-205ENST00000509088 RASSF10A6NK89 507 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 CRTAMO95727 393 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 MMEP08473 750 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 FAM153BP0C7A2 387 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 MSX2P35548 267 aaPredicted RBP6.77□□□□□ -1.33
LINC01088-205ENST00000509088 MRE11P49959 708 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 FILIP1Q7Z7B0 1213 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 C1orf210Q8IVY1 113 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 BCL6BQ8N143 479 aaPredicted RBP6.77□□□□□ -1.33
LINC01088-205ENST00000509088 FAM89AQ96GI7 184 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 AGO3Q9H9G7 860 aaKnown RBP6.77□□□□□ -1.33
LINC01088-205ENST00000509088 SNTG2Q9NY99 539 aa6.77□□□□□ -1.33
LINC01088-205ENST00000509088 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
LINC01088-205ENST00000509088 RPS19P39019 145 aaKnown RBP6.76□□□□□ -1.33
LINC01088-205ENST00000509088 ECE1P42892 770 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 GABREP78334 506 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 SSRP1Q08945 709 aaKnown RBP6.76□□□□□ -1.33
LINC01088-205ENST00000509088 MTERF2Q49AM1 385 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 GIMAP6Q6P9H5 292 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 ASB15Q8WXK1 588 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 MKL1Q969V6 931 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 CHFRQ96EP1 664 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 DEPDC7Q96QD5 511 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 CDC6Q99741 560 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 CSRNP2Q9H175 543 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 OR10A5Q9H207 317 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 IKZF4Q9H2S9 585 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 C12orf65Q9H3J6 166 aaKnown RBP6.76□□□□□ -1.33
LINC01088-205ENST00000509088 MSL2Q9HCI7 577 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 PLA2G3Q9NZ20 509 aa6.76□□□□□ -1.33
LINC01088-205ENST00000509088 A0A0G2JNJ9 132 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 U2SURPO15042 1029 aaKnown RBP6.75□□□□□ -1.33
LINC01088-205ENST00000509088 TGFB2P61812 414 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 MOGSQ13724 837 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 CRY1Q16526 586 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 CISD2Q8N5K1 135 aaKnown RBP6.75□□□□□ -1.33
LINC01088-205ENST00000509088 OR14K1Q8NGZ2 314 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 SRPK1Q96SB4 655 aaKnown RBP6.75□□□□□ -1.33
LINC01088-205ENST00000509088 CCDC113Q9H0I3 377 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 OR10A2Q9H208 303 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 TLR9Q9NR96 1032 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 CEP72Q9P209 647 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 Q9UFV3 132 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 FANCIQ9NVI1 1328 aa6.75□□□□□ -1.33
LINC01088-205ENST00000509088 DNM2P50570 870 aa6.74□□□□□ -1.33
LINC01088-205ENST00000509088 STAT5BP51692 787 aa6.74□□□□□ -1.33
LINC01088-205ENST00000509088 ST5P78524 1137 aa6.74□□□□□ -1.33
LINC01088-205ENST00000509088 GLIPR1L2Q4G1C9 344 aa6.74□□□□□ -1.33
LINC01088-205ENST00000509088 SPTY2D1Q68D10 685 aaPredicted RBP6.74□□□□□ -1.33
LINC01088-205ENST00000509088 OTOP2Q7RTS6 562 aa6.74□□□□□ -1.33
LINC01088-205ENST00000509088 DHRS4Q9BTZ2 278 aa6.74□□□□□ -1.33
LINC01088-205ENST00000509088 TRIM8Q9BZR9 551 aa6.74□□□□□ -1.33
LINC01088-205ENST00000509088 SLC52A2Q9HAB3 445 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms