RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 UBXN2AP68543 259 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 COG2Q14746 738 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 EDRF1Q3B7T1 1238 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 TKFCQ3LXA3 575 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 MUM1L1Q5H9M0 696 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 PDXDC1Q6P996 788 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 RRAGAQ7L523 313 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 CAGE1Q8TC20 777 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 SYN2Q92777 582 aaPredicted RBP12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 ATG4CQ96DT6 458 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 NACC1Q96RE7 527 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 REEP2Q9BRK0 252 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 ACBD3Q9H3P7 528 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 JADE2Q9NQC1 790 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 OLFML3Q9NRN5 406 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 KCNH7Q9NS40 1196 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 CEP72Q9P209 647 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 FZD1Q9UP38 647 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 AFG3L2Q9Y4W6 797 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 SSU72P8A0A1W2PR75 194 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 USP2O75604 605 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 HMGCS2P54868 508 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 MRPS9P82933 396 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 CYP4A11Q02928 519 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 BMT2Q1RMZ1 405 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 MAP9Q49MG5 647 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 WDR93Q6P2C0 686 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 CATSPERGQ6ZRH7 1159 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 EPM2AIP1Q7L775 607 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 SCFD1Q8WVM8 642 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 DYDC2Q96IM9 177 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 PNKPQ96T60 521 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 UBXN6Q9BZV1 441 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 LACRTQ9GZZ8 138 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 KCTD10Q9H3F6 313 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 UNC45AQ9H3U1 944 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 TBC1D22BQ9NU19 505 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 RGL1Q9NZL6 768 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 TMOD4Q9NZQ9 345 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 ARHGAP20Q9P2F6 1191 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 JRKLQ9Y4A0 524 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 LOXHD1Q8IVV2 1947 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 MACROD2A1Z1Q3 448 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 ENC1O14682 589 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 MAP2K7O14733 419 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 CETN3O15182 167 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 DHX15O43143 795 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 OAS2P29728 719 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 NF2P35240 595 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 CYP27A1Q02318 531 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 PGM5Q15124 567 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 BEND6Q5SZJ8 279 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 RINT1Q6NUQ1 792 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 GLIS3Q8NEA6 775 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 BAP1Q92560 729 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 AGO4Q9HCK5 861 aaKnown RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 ST7Q9NRC1 585 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 RNF146Q9NTX7 359 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 HOXC10Q9NYD6 342 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 ZNF214Q9UL59 606 aaPredicted RBP12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 TRAF3IP3Q9Y228 551 aa12.7□□□□□ -0.38
PRPF40B-203ENST00000508736 PAPPA2Q9BXP8 1791 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 TARSL2A2RTX5 802 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 MAFGO15525 162 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 TTLL12Q14166 644 aaPredicted RBP12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 SLC9C1Q4G0N8 1177 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 C1orf186Q6ZWK4 172 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 TRIM59Q8IWR1 403 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 TPH2Q8IWU9 490 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 IL31RAQ8NI17 732 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 TAAR1Q96RJ0 339 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 PDCD2LQ9BRP1 358 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 PXMP2Q9NR77 195 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 HDAC6Q9UBN7 1215 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 SEL1LQ9UBV2 794 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 ODF2LQ9ULJ1 636 aa12.69□□□□□ -0.38
PRPF40B-203ENST00000508736 MYH10P35580 1976 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 PDXKO00764 312 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 EPHB6O15197 1021 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 PPP1R12BO60237 982 aaPredicted RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 TBCAO75347 108 aaKnown RBP12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 TOMM70O94826 608 aa12.68□□□□□ -0.38
PRPF40B-203ENST00000508736 LYPLA2O95372 231 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms