RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 KRT85P78386 507 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
PTPN20-220ENST00000508715 NAALADL2Q58DX5 795 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 XKR3Q5GH77 459 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 TRAF7Q6Q0C0 670 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 SERINC5Q86VE9 423 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 C7orf31Q8N865 590 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 KRI1Q8N9T8 703 aaKnown RBP11.58□□□□□ -0.56
PTPN20-220ENST00000508715 NEK9Q8TD19 979 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 SNX29Q8TEQ0 813 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 ATP6V0A1Q93050 837 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 AK8Q96MA6 479 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 PLIN2Q99541 437 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 OSBPL7Q9BZF2 842 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 TCEAL9Q9UHQ7 104 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 NRCAMQ92823 1304 aa11.58□□□□□ -0.56
PTPN20-220ENST00000508715 COL1A2P08123 1366 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 IGKV6-21A0A0C4DH24 114 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 C17orf102A2RUQ5 167 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 E9PMD0 336 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 CUTAO60888 179 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 KLRC1P26715 233 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 YWHABP31946 246 aaKnown RBP11.57□□□□□ -0.56
PTPN20-220ENST00000508715 RARRES1P49788 294 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 IGBP1P78318 339 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 DRP2Q13474 957 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 GPNMBQ14956 572 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 KARSQ15046 597 aaKnown RBP11.57□□□□□ -0.56
PTPN20-220ENST00000508715 PTGISQ16647 500 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 ZNF484Q5JVG2 852 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 MTHFD1LQ6UB35 978 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 CABP7Q86V35 215 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 SYMPKQ92797 1274 aaKnown RBP11.57□□□□□ -0.56
PTPN20-220ENST00000508715 FAM167AQ96KS9 214 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 SPATA32Q96LK8 384 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 NOC4LQ9BVI4 516 aaKnown RBP11.57□□□□□ -0.56
PTPN20-220ENST00000508715 SEZ6LQ9BYH1 1024 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 XPNPEP1Q9NQW7 623 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 CYP26B1Q9NR63 512 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 BLOC1S4Q9NUP1 217 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 DDX19AQ9NUU7 478 aaKnown RBP11.57□□□□□ -0.56
PTPN20-220ENST00000508715 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
PTPN20-220ENST00000508715 CFAP45Q9UL16 551 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
PTPN20-220ENST00000508715 RRN3P2A6NIE6 340 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 KIAA0355O15063 1070 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 CLTBP09497 229 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 NCLP19338 710 aaKnown RBP11.56□□□□□ -0.56
PTPN20-220ENST00000508715 MUTP22033 750 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 MTERF2Q49AM1 385 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 RESP18Q5W5W9 173 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 KRT79Q5XKE5 535 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 C7orf61Q8IZ16 206 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 KIAA0319LQ8IZA0 1049 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 ERMNQ8TAM6 284 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 HTATIP2Q9BUP3 242 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 RAB34Q9BZG1 259 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 WNT8AQ9H1J5 351 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 DHX33Q9H6R0 707 aaKnown RBP11.56□□□□□ -0.56
PTPN20-220ENST00000508715 NRBP2Q9NSY0 501 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 ANKEF1Q9NU02 776 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 TUBE1Q9UJT0 475 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 ATP6V1DQ9Y5K8 247 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 PTPRSQ13332 1948 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 MROH7Q68CQ1 1323 aa11.56□□□□□ -0.56
PTPN20-220ENST00000508715 DCDC2CA8MYV0 355 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 MAFO75444 373 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-220ENST00000508715 XRCC6P12956 609 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPN20-220ENST00000508715 SYN1P17600 705 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 PLCG1P19174 1290 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 CYP2C18P33260 490 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 UBA7P41226 1012 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 RBL2Q08999 1139 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 PTK7Q13308 1070 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 MBTPS1Q14703 1052 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 E2F4Q16254 413 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 XKR9Q5GH70 373 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 HAUS3Q68CZ6 603 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 LRRC71Q8N4P6 559 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 NACC1Q96RE7 527 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 PANK2Q9BZ23 570 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 SCAND2PQ9GZW5 306 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-220ENST00000508715 POLD4Q9HCU8 107 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
PTPN20-220ENST00000508715 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 MICAL3Q7RTP6 2002 aa11.55□□□□□ -0.56
PTPN20-220ENST00000508715 FAM237AA0A1B0GTK4 181 aa11.54□□□□□ -0.56
PTPN20-220ENST00000508715 EVI5O60447 810 aa11.54□□□□□ -0.56
PTPN20-220ENST00000508715 DKC1O60832 514 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPN20-220ENST00000508715 EYA4O95677 639 aa11.54□□□□□ -0.56
PTPN20-220ENST00000508715 ME1P48163 572 aa11.54□□□□□ -0.56
PTPN20-220ENST00000508715 CLCN3P51790 818 aa11.54□□□□□ -0.56
PTPN20-220ENST00000508715 SLC12A3P55017 1021 aa11.54□□□□□ -0.56
PTPN20-220ENST00000508715 MGAT3Q09327 533 aa11.54□□□□□ -0.56
PTPN20-220ENST00000508715 ZRSR1Q15695 479 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms