RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 PPARAQ07869 468 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 IMMTQ16891 758 aaKnown RBP6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 ARTNQ5T4W7 220 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 NBPF12Q5TAG4 269 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 TATDN1Q6P1N9 297 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 CTR9Q6PD62 1173 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 CCDC129Q6ZRS4 1044 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 FAM214BQ7L5A3 538 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 HDXQ7Z353 690 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 CCDC84Q86UT8 332 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 CRACR2BQ8N4Y2 399 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 C2orf69Q8N8R5 385 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 GOLM1Q8NBJ4 401 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 RIN3Q8TB24 985 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 RASGRP4Q8TDF6 673 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 HHIPL1Q96JK4 782 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 DUSP23Q9BVJ7 150 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 OSBPL1AQ9BXW6 950 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 WNT10AQ9GZT5 417 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 TMEM39BQ9GZU3 492 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 CAPN10Q9HC96 672 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 ZNF112Q9UJU3 913 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 PALD1Q9ULE6 856 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 INPP5FQ9Y2H2 1132 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 POLR3KQ9Y2Y1 108 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 SNCAIPQ9Y6H5 919 aa6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 DDX60LQ5H9U9 1706 aaKnown RBP6.47□□□□□ -1.37
HMGB1P44-201ENST00000508597 LAMB1P07942 1786 aa6.46□□□□□ -1.37
HMGB1P44-201ENST00000508597 PAPPA2Q9BXP8 1791 aa6.46□□□□□ -1.37
HMGB1P44-201ENST00000508597 LAMA4Q16363 1823 aa6.46□□□□□ -1.37
HMGB1P44-201ENST00000508597 FOXP2O15409 715 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 TLR3O15455 904 aaKnown RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 ORC4O43929 436 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 CTNND1O60716 968 aaKnown RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 USP2O75604 605 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 CELF2O95319 508 aaKnown RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 FGRP09769 529 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZKSCAN1P17029 563 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 MCCP23508 829 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 GABPAQ06546 454 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 PAK2Q13177 524 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 CCDC178Q5BJE1 867 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 NOL9Q5SY16 702 aaKnown RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 VPS53Q5VIR6 699 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 C16orf86Q6ZW13 317 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZFPM1Q8IX07 1006 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 ANKRD13AQ8IZ07 590 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 TOP6BLQ8N6T0 577 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 FAM181AQ8N9Y4 354 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 STAG1Q8WVM7 1258 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 GATAD2BQ8WXI9 593 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 SPATA32Q96LK8 384 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 HEXIM2Q96MH2 286 aaKnown RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 SPON2Q9BUD6 331 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 LSG1Q9H089 658 aaKnown RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 CNNM2Q9H8M5 875 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 GBA2Q9HCG7 927 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 LRRC4CQ9HCJ2 640 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 EPB41L4AQ9HCS5 686 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 SAP30BPQ9UHR5 308 aaKnown RBP6.46□□□□□ -1.38
HMGB1P44-201ENST00000508597 SCO2A0A1W2PP80 73 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 GREM1O60565 184 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 ASNSP08243 561 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 CAP2P40123 477 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 PLCD1P51178 756 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 RPL6Q02878 288 aaKnown RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 PTH1RQ03431 593 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 TRDNQ13061 729 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 KRT32Q14532 448 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 NECTIN1Q15223 517 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 CERKLQ49MI3 558 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 AKNAD1Q5T1N1 836 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 CST9Q5W186 159 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 NFXL1Q6ZNB6 911 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 MFSD6Q6ZSS7 791 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZNF444Q8N0Y2 327 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 GPRASP2Q96D09 838 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 DPH2Q9BQC3 489 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 MTA3Q9BTC8 594 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 NT5C1AQ9BXI3 368 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 LRRC3Q9BY71 257 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 KRT23Q9C075 422 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 IL25Q9H293 177 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 UPF2Q9HAU5 1272 aaKnown RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 MKNK2Q9HBH9 465 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 CABP5Q9NP86 173 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 TJP2Q9UDY2 1190 aa6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZC3H7BQ9UGR2 993 aaKnown RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 ANGEL1Q9UNK9 670 aaKnown RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 RBM8AQ9Y5S9 174 aaKnown RBP6.45□□□□□ -1.38
HMGB1P44-201ENST00000508597 SIPA1L1O43166 1804 aa6.44□□□□□ -1.38
HMGB1P44-201ENST00000508597 UPK3BL1B0FP48 263 aa6.44□□□□□ -1.38
HMGB1P44-201ENST00000508597 UPK3BL2E5RIL1 263 aa6.44□□□□□ -1.38
HMGB1P44-201ENST00000508597 TRAF5O00463 557 aa6.44□□□□□ -1.38
HMGB1P44-201ENST00000508597 DNAJA2O60884 412 aa6.44□□□□□ -1.38
HMGB1P44-201ENST00000508597 COBLO75128 1261 aa6.44□□□□□ -1.38
HMGB1P44-201ENST00000508597 SLITRK5O94991 958 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms