RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 LRRC14Q15048 493 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 CNGA3Q16281 694 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PREPLQ4J6C6 727 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ACAD11Q709F0 780 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 B4GALNT2Q8NHY0 566 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 HDAC11Q96DB2 347 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ING2Q9H160 280 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 CARD9Q9H257 536 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 CCDC134Q9H6E4 229 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 SLC52A2Q9HAB3 445 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 SCHIP1Q9P0W5 487 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 GDAQ9Y2T3 454 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 UHRF1BP1LA0JNW5 1464 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ADGRL3Q9HAR2 1447 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ZBBXA8MT70 800 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 KLRF2D3W0D1 207 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 GAS7O60861 476 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TJP3O95049 919 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 CCDC159P0C7I6 412 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PLCG1P19174 1290 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TRPC1P48995 793 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 YTHDF3Q7Z739 585 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 NOA1Q8NC60 698 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 GJA10Q969M2 543 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 SETDB2Q96T68 719 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 WNT8AQ9H1J5 351 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 RANBP17Q9H2T7 1088 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 DCTN4Q9UJW0 460 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TLK1Q9UKI8 766 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 KPNA7A9QM74 516 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 HMGB3O15347 200 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 CDH16O75309 829 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 HSPA4LO95757 839 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PAX7P23759 505 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PRCPP42785 496 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 EPHB1P54762 984 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 BBS9Q3SYG4 887 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 FAM47AQ5JRC9 791 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 RABGAP1LQ5R372 815 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PDXDC1Q6P996 788 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 POTEAQ6S8J7 498 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 RAD9BQ6WBX8 426 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TTC13Q8NBP0 860 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ZNF483Q8TF39 744 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 LRRC59Q96AG4 307 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ALKBH8Q96BT7 664 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 RBM41Q96IZ5 413 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PSTPIP2Q9H939 334 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ATG3Q9NT62 314 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 RHBDL2Q9NX52 303 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TMOD4Q9NZQ9 345 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 ADD3Q9UEY8 706 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 KIAA1024Q9UPX6 916 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PCDH11XQ9BZA7 1347 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PCDH11YQ9BZA8 1340 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 PLEKHG1Q9ULL1 1385 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 MED14O60244 1454 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 FOSP01100 380 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 GPC5P78333 572 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 MRPS15P82914 257 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 KCNB1Q14721 858 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TRIP13Q15645 432 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 FAM83BQ5T0W9 1011 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 COL23A1Q86Y22 540 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 RIBC1Q8N443 379 aaPredicted RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 GPKOWQ92917 476 aaPredicted RBP eCLIP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 FUCA2Q9BTY2 467 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 FOXP3Q9BZS1 431 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TMEM206Q9H813 350 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 GINM1Q9NU53 330 aa7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 TLR7Q9NYK1 1049 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 SAP30BPQ9UHR5 308 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 IPO11Q9UI26 975 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 MTO1Q9Y2Z2 717 aaKnown RBP7.83□□□□□ -1.16
UBE2D3-224ENST00000508474 USP17L12C9JPN9 530 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 USP17L21D6R901 530 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 KRT14P02533 472 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 PRLRP16471 622 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 SLC1A4P43007 532 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 BASP1P80723 227 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 DSG1Q02413 1049 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ORC2Q13416 577 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 KIAA1755Q5JYT7 1200 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 TMED8Q6PL24 325 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 SHC4Q6S5L8 630 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 RAPH1Q70E73 1250 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 OPTNQ96CV9 577 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ERP27Q96DN0 273 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 KRT82Q9NSB4 513 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 SRRM3A6NNA2 597 aaPredicted RBP7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 E9PMD0 336 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 TULP2O00295 520 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 PFDN6O15212 129 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 AHCYL1O43865 530 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ADCY3O60266 1144 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 LRRC41Q15345 812 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 TBCCQ15814 346 aa7.82□□□□□ -1.16
UBE2D3-224ENST00000508474 ZCWPW2Q504Y3 356 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms