RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CCDC155Q8N6L0 562 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 IQUBQ8NA54 791 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 SLC7A3Q8WY07 619 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 LRRC27Q9C0I9 530 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 CUEDC2Q9H467 287 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 CYP26B1Q9NR63 512 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 SETD4Q9NVD3 440 aa22.39■■□□□ 1.17
USP53-203ENST00000507597 EYA4O95677 639 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 STAT6P42226 847 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 IGBP1P78318 339 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 KARSQ15046 597 aaKnown RBP22.38■■□□□ 1.17
USP53-203ENST00000507597 PTGISQ16647 500 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 MTERF2Q49AM1 385 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 ANO5Q75V66 913 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 TMEM87AQ8NBN3 555 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 MRPS27Q92552 414 aaKnown RBP22.38■■□□□ 1.17
USP53-203ENST00000507597 USP25Q9UHP3 1055 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 TUBE1Q9UJT0 475 aa22.38■■□□□ 1.17
USP53-203ENST00000507597 MYH9P35579 1960 aaKnown RBP22.38■■□□□ 1.17
USP53-203ENST00000507597 CENPFP49454 3210 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 GRIN2DO15399 1336 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 DGAT1O75907 488 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 POLGP54098 1239 aaPredicted RBP22.37■■□□□ 1.17
USP53-203ENST00000507597 RTP1P59025 263 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 CDC42EP1Q00587 391 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 AMPD3Q01432 767 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 TMEM119Q4V9L6 283 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 SHC4Q6S5L8 630 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 PIGOQ8TEQ8 1089 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 MAGEF1Q9HAY2 307 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 BMP2KQ9NSY1 1161 aaPredicted RBP22.37■■□□□ 1.17
USP53-203ENST00000507597 KCND2Q9NZV8 630 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 ATP11BQ9Y2G3 1177 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 SCN10AQ9Y5Y9 1956 aa22.37■■□□□ 1.17
USP53-203ENST00000507597 PQBP1O60828 265 aaKnown RBP22.36■■□□□ 1.17
USP53-203ENST00000507597 PLCG1P19174 1290 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 KLRC1P26715 233 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 RARRES1P49788 294 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 PTK7Q13308 1070 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 GRB10Q13322 594 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 TARBP2Q15633 366 aaKnown RBP22.36■■□□□ 1.17
USP53-203ENST00000507597 MTHFD1LQ6UB35 978 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 CEP57L1Q8IYX8 460 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 NME8Q8N427 588 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 LMBR1Q8WVP7 490 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 TCP11Q8WWU5 503 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 CHAMP1Q96JM3 812 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 TIPINQ9BVW5 301 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 WRAP73Q9P2S5 460 aaPredicted RBP22.36■■□□□ 1.17
USP53-203ENST00000507597 PRKAG2Q9UGJ0 569 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 KCNH3Q9ULD8 1083 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 PCDHA2Q9Y5H9 948 aa22.36■■□□□ 1.17
USP53-203ENST00000507597 SMIM35A0A1B0GVV1 85 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 MBLAC1A4D2B0 266 aaPredicted RBP22.35■■□□□ 1.17
USP53-203ENST00000507597 STBD1O95210 358 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 CYP2C9P11712 490 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 HOXC8P31273 242 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 BFSP2Q13515 415 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 GDF6Q6KF10 455 aaPredicted RBP22.35■■□□□ 1.17
USP53-203ENST00000507597 SV2BQ7L1I2 683 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 FAM126BQ8IXS8 530 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 FSIP1Q8NA03 581 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 MCPH1Q8NEM0 835 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 LARP4BQ92615 738 aaKnown RBP22.35■■□□□ 1.17
USP53-203ENST00000507597 PNMA5Q96PV4 448 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 MAP7D2Q96T17 732 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 BHMT2Q9H2M3 363 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 KCNG1Q9UIX4 513 aa22.35■■□□□ 1.17
USP53-203ENST00000507597 E9PMD0 336 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 CAND2O75155 1236 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 MAFO75444 373 aaPredicted RBP22.34■■□□□ 1.17
USP53-203ENST00000507597 SSBP05455 408 aaKnown RBP eCLIP22.34■■□□□ 1.17
USP53-203ENST00000507597 PLA2G4BP0C869 781 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 SYKP43405 635 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 UBE2HP62256 183 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 ADAM17P78536 824 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 TLE2Q04725 743 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 ECM1Q16610 540 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 LRRC26Q2I0M4 334 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 TRIM60Q495X7 471 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 PLA2G4FQ68DD2 849 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 USP49Q70CQ1 688 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 METTL13Q8N6R0 699 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 PDILTQ8N807 584 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 SYT2Q8N9I0 419 aaPredicted RBP22.34■■□□□ 1.17
USP53-203ENST00000507597 CAGE1Q8TC20 777 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 PLIN2Q99541 437 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 MTRQ99707 1265 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 ATP6V0A4Q9HBG4 840 aa22.34■■□□□ 1.17
USP53-203ENST00000507597 M0QZ92 97 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 POLR2DO15514 142 aaKnown RBP22.33■■□□□ 1.17
USP53-203ENST00000507597 TREHO43280 583 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 B4GALT4O60513 344 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 CLTBP09497 229 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 NPEPPSP55786 919 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 EFCAB12Q6NXP0 572 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 RAD54LQ92698 747 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 PANK2Q9BZ23 570 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 SUGCTQ9HAC7 445 aa22.33■■□□□ 1.17
USP53-203ENST00000507597 FAM237AA0A1B0GTK4 181 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms