RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RNF180Q86T96 592 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 SYT2Q8N9I0 419 aaPredicted RBP15.82■□□□□ 0.12
RNF4-208ENST00000507247 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 BBXQ8WY36 941 aaPredicted RBP15.82■□□□□ 0.12
RNF4-208ENST00000507247 PAGE5Q96GU1 130 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 FAM167AQ96KS9 214 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 CEP89Q96ST8 783 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 NIFKQ9BYG3 293 aaKnown RBP15.82■□□□□ 0.12
RNF4-208ENST00000507247 CLSTN2Q9H4D0 955 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 MAGEF1Q9HAY2 307 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 KBTBD4Q9NVX7 518 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 TMEM63CQ9P1W3 806 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 MYH11P35749 1972 aa15.82■□□□□ 0.12
RNF4-208ENST00000507247 TRIP12Q14669 1992 aaPredicted RBP15.82■□□□□ 0.12
RNF4-208ENST00000507247 ZBTB42B2RXF5 422 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 ZEB2O60315 1214 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 CASP1P29466 404 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
RNF4-208ENST00000507247 TARBP2Q15633 366 aaKnown RBP15.81■□□□□ 0.12
RNF4-208ENST00000507247 CAMK4Q16566 473 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 KIAA0753Q2KHM9 967 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 MTERF2Q49AM1 385 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 XKR9Q5GH70 373 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 SV2BQ7L1I2 683 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 PCSK9Q8NBP7 692 aaKnown RBP15.81■□□□□ 0.12
RNF4-208ENST00000507247 MTG1Q9BT17 334 aaPredicted RBP15.81■□□□□ 0.12
RNF4-208ENST00000507247 RUSC1Q9BVN2 902 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 TNMDQ9H2S6 317 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 CYP26B1Q9NR63 512 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 NRBP2Q9NSY0 501 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 TRPC6Q9Y210 931 aa15.81■□□□□ 0.12
RNF4-208ENST00000507247 EVPLQ92817 2033 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 ARHGEF35A5YM69 484 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 MYMKA6NI61 221 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 HBP1O60381 514 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 GJB1P08034 283 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 CYP11B2P19099 503 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 ACLYP53396 1101 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 SKOR2Q2VWA4 1001 aaPredicted RBP15.8■□□□□ 0.12
RNF4-208ENST00000507247 ARSHQ5FYA8 562 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 RINT1Q6NUQ1 792 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 CAVIN1Q6NZI2 390 aaKnown RBP15.8■□□□□ 0.12
RNF4-208ENST00000507247 OTUD6AQ7L8S5 288 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 GPBP1Q86WP2 473 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 ARRDC4Q8NCT1 418 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 U2AF1L4Q8WU68 220 aaKnown RBP15.8■□□□□ 0.12
RNF4-208ENST00000507247 TRAPPC12Q8WVT3 735 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 ERCC4Q92889 916 aaPredicted RBP15.8■□□□□ 0.12
RNF4-208ENST00000507247 CEP170P1Q96L14 293 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 TSEN34Q9BSV6 310 aaKnown RBP15.8■□□□□ 0.12
RNF4-208ENST00000507247 KATNAL1Q9BW62 490 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 CRISPLD2Q9H0B8 497 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 NUP62CLQ9H1M0 184 aa15.8■□□□□ 0.12
RNF4-208ENST00000507247 NPHP3-ACAD11A0A0J9YXS1 232 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 USO1O60763 962 aaKnown RBP15.79■□□□□ 0.12
RNF4-208ENST00000507247 SGPL1O95470 568 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 SMIM10L2AP0DMW4 78 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 SMIM10L2BP0DMW5 78 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 INSRRP14616 1297 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 CHMP4BP1P59074 171 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 PNOCQ13519 176 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 CUL4BQ13620 913 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 POSTNQ15063 836 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 KANK3Q6NY19 840 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 PADI6Q6TGC4 694 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 C1orf186Q6ZWK4 172 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 ELOA2Q8IYF1 753 aaPredicted RBP15.79■□□□□ 0.12
RNF4-208ENST00000507247 CCDC43Q96MW1 224 aaKnown RBP15.79■□□□□ 0.12
RNF4-208ENST00000507247 TRIM9Q9C026 710 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 BLZF1Q9H2G9 400 aa15.79■□□□□ 0.12
RNF4-208ENST00000507247 BMP2KQ9NSY1 1161 aaPredicted RBP15.79■□□□□ 0.12
RNF4-208ENST00000507247 COL1A2P08123 1366 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 GRIN2DO15399 1336 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 A0A1W2PQ45 241 aaPredicted RBP15.78■□□□□ 0.12
RNF4-208ENST00000507247 A0A1W2PQY0 241 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 MOXD2PA6NHM9 499 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 KBTBD13C9JR72 458 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 DNM1LO00429 736 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 GTPBP6O43824 516 aaPredicted RBP15.78■□□□□ 0.12
RNF4-208ENST00000507247 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
RNF4-208ENST00000507247 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
RNF4-208ENST00000507247 RAD51AP2Q09MP3 1159 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 DPYDQ12882 1025 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 PPFIA1Q13136 1202 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 HIC1Q14526 733 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 GRIK4Q16099 956 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 DDX12PQ92771 950 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 DNAJC19Q96DA6 116 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 ZBTB10Q96DT7 871 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 C7orf25Q9BPX7 421 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 XPNPEP1Q9NQW7 623 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 PDLIM7Q9NR12 457 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 PHF24Q9UPV7 400 aa15.78■□□□□ 0.12
RNF4-208ENST00000507247 GJA8P48165 433 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 IGBP1P78318 339 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 NBPF20Q3BBV1 942 aa15.77■□□□□ 0.12
RNF4-208ENST00000507247 ZNF484Q5JVG2 852 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms