RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 RIOX1Q9H6W3 641 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 CYP39A1Q9NYL5 469 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 TMEM63CQ9P1W3 806 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 CYP46A1Q9Y6A2 500 aa10.96□□□□□ -0.65
CLCN3-205ENST00000506924 BRCA2P51587 3418 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 RPTORQ8N122 1335 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 GOLGA8AA7E2F4 631 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 ZBTB5O15062 677 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 GPR182O15218 404 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 TFRCP02786 760 aaKnown RBP10.95□□□□□ -0.66
CLCN3-205ENST00000506924 CALM1P0DP23 149 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 CALM2P0DP24 149 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 CALM3P0DP25 149 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 EPXP11678 715 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 CDC27P30260 824 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 TOB2Q14106 344 aaPredicted RBP10.95□□□□□ -0.66
CLCN3-205ENST00000506924 MAP3K21Q5TCX8 1036 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 OLFML2BQ68BL8 750 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 DNAJC14Q6Y2X3 702 aaPredicted RBP10.95□□□□□ -0.66
CLCN3-205ENST00000506924 MTMR8Q96EF0 704 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 MAP3K14Q99558 947 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 AMNQ9BXJ7 453 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 PDRG1Q9NUG6 133 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 PCDHA1Q9Y5I3 950 aa10.95□□□□□ -0.66
CLCN3-205ENST00000506924 ASTN1O14525 1302 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 PFASO15067 1338 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 ABCB11O95342 1321 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 PNMA6FA0A0J9YX94 578 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 GJB1P08034 283 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 CELA2BP08218 269 aaPredicted RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 METAP2P50579 478 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 RPS6P62753 249 aaKnown RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 INSM1Q01101 510 aaPredicted RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 DSC3Q14574 896 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 RNF207Q6ZRF8 634 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 TMTC3Q6ZXV5 915 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 NOL8Q76FK4 1167 aaKnown RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 FAM133AQ8N9E0 248 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 U2AF1L4Q8WU68 220 aaKnown RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 SHISA4Q96DD7 197 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 RRP36Q96EU6 259 aaKnown RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 TINF2Q9BSI4 451 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 TM6SF1Q9BZW5 370 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 PAK6Q9NQU5 681 aaPredicted RBP10.94□□□□□ -0.66
CLCN3-205ENST00000506924 MCM3APO60318 1980 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 LCTP09848 1927 aa10.94□□□□□ -0.66
CLCN3-205ENST00000506924 DTNBO60941 627 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 KIF4AO95239 1232 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 SGPL1O95470 568 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 SNAI1O95863 264 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 CFBP00751 764 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 CYBAP13498 195 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 ALAS2P22557 587 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 HOXA13P31271 388 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 GJA8P48165 433 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 GNAQP50148 359 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 STK3Q13188 491 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 KANK3Q6NY19 840 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 ARMCX2Q7L311 632 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 EEPD1Q7L9B9 569 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 LENG1Q96BZ8 264 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 LZTS2Q9BRK4 669 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 SPZ1Q9BXG8 430 aa10.93□□□□□ -0.66
CLCN3-205ENST00000506924 UBE2OQ9C0C9 1292 aaKnown RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 NCOA5Q9HCD5 579 aaKnown RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 ZHX1Q9UKY1 873 aaPredicted RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 DIS3Q9Y2L1 958 aaKnown RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 MRPL11Q9Y3B7 192 aaKnown RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
CLCN3-205ENST00000506924 A6NHS1 94 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 PHACTR2O75167 634 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 PDIA3P30101 505 aaKnown RBP10.92□□□□□ -0.66
CLCN3-205ENST00000506924 ADH7P40394 386 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 EDARADDQ8WWZ3 215 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 TAAR1Q96RJ0 339 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 AGXT2Q9BYV1 514 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 CHRDQ9H2X0 955 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 ENAMQ9NRM1 1142 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 RBM28Q9NW13 759 aaKnown RBP10.92□□□□□ -0.66
CLCN3-205ENST00000506924 DNAJB12Q9NXW2 375 aaKnown RBP10.92□□□□□ -0.66
CLCN3-205ENST00000506924 COL20A1Q9P218 1284 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 PNMA2Q9UL42 364 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 CNPY2Q9Y2B0 182 aa10.92□□□□□ -0.66
CLCN3-205ENST00000506924 CNTNAP5Q8WYK1 1306 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 RBBP6Q7Z6E9 1792 aaKnown RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 EIF5BO60841 1220 aaKnown RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 ZNF865P0CJ78 1059 aaPredicted RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 PTGS1P23219 599 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 ALDH5A1P51649 535 aaPredicted RBP10.91□□□□□ -0.66
CLCN3-205ENST00000506924 NEK4P51957 841 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 AK2P54819 239 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 ANAPC15P60006 121 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 PLCB3Q01970 1234 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 HYAL2Q12891 473 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 ACVR2BQ13705 512 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 LYPD4Q6UWN0 246 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 MAMDC4Q6UXC1 1216 aa10.91□□□□□ -0.66
CLCN3-205ENST00000506924 HEATR3Q7Z4Q2 680 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms