RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 KLRC3Q07444 240 aa18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 SF3A3Q12874 501 aaKnown RBP eCLIP18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 SEPT2Q15019 361 aa18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 CALCRLQ16602 461 aa18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 CAPRIN2Q6IMN6 1127 aaKnown RBP18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 ZC3H3Q8IXZ2 948 aaKnown RBP18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 LZTS2Q9BRK4 669 aa18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 ERP44Q9BS26 406 aa18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 NSRP1Q9H0G5 558 aaKnown RBP18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 NR2E1Q9Y466 385 aa18.58■□□□□ 0.57
SQSTM1-211ENST00000506690 FLOT1O75955 427 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 AGTP01019 485 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 ANXA13P27216 316 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 IFI35P80217 286 aaPredicted RBP18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 PDIA5Q14554 519 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 FAM26FQ5R3K3 315 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 DENND2CQ68D51 928 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 SPZ1Q9BXG8 430 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 AZI2Q9H6S1 392 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 KIF9Q9HAQ2 790 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 HOMER3Q9NSC5 361 aa18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 SPATS2LQ9NUQ6 558 aaKnown RBP18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 CORO1CQ9ULV4 474 aaPredicted RBP18.58■□□□□ 0.56
SQSTM1-211ENST00000506690 ITGB4P16144 1822 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 RGS16O15492 202 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 FGGP02679 453 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 VIMP08670 466 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 ACTN1P12814 892 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 KCNH2Q12809 1159 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 DAAM2Q86T65 1068 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 FGFBP2Q9BYJ0 223 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 POTEMA6NI47 508 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 UCHL3P15374 230 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 UBE4AQ14139 1066 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 TMEM266Q2M3C6 531 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 TNFAIP8L3Q5GJ75 292 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 SNX29Q8TEQ0 813 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 SAAL1Q96ER3 474 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 ECT2Q9H8V3 914 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 CNOT7Q9UIV1 285 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 INTUQ9ULD6 942 aa18.57■□□□□ 0.56
SQSTM1-211ENST00000506690 SPDYE3A6NKU9 549 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 PDE6CP51160 858 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 SARNPP82979 210 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 DR1Q01658 176 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 PPP2R5EQ16537 467 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 CAVIN4Q5BKX8 364 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 C6orf118Q5T5N4 469 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 RBM46Q8TBY0 533 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 TMEM109Q9BVC6 243 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 MOV10L1Q9BXT6 1211 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 KCTD10Q9H3F6 313 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 PCDHA2Q9Y5H9 948 aa18.56■□□□□ 0.56
SQSTM1-211ENST00000506690 TLDC2A0PJX2 215 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 EME2A4GXA9 379 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 USP17L3A6NCW0 530 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 USP17L4A6NCW7 530 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 KLRF2D3W0D1 207 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 IGF2BP3O00425 579 aaKnown RBP eCLIP18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 H2AFZP0C0S5 128 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 EPS15P42566 896 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 CCNG1P51959 295 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 DRG2P55039 364 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 ADCY2Q08462 1091 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 BNIP1Q12981 228 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 SLC29A2Q14542 456 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 KRT79Q5XKE5 535 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 ZDHHC24Q6UX98 284 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 H2AFVQ71UI9 128 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 USP17L1Q7RTZ2 530 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 CROCCP2Q86T23 111 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 FAM84BQ96KN1 310 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 GOPCQ9HD26 462 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 MCM9Q9NXL9 1143 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 DAAM1Q9Y4D1 1078 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 SLC37A4O43826 429 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 USP17L8P0C7I0 530 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 GOLGA8HP0CJ92 632 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 SLC9A1P19634 815 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 BLMHQ13867 455 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 ECM1Q16610 540 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 GBP7Q8N8V2 638 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 PRCCQ92733 491 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 ARHGEF3Q9NR81 526 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 KCNG1Q9UIX4 513 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 AMFRQ9UKV5 643 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 USP15Q9Y4E8 981 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 LAMB2P55268 1798 aa18.55■□□□□ 0.56
SQSTM1-211ENST00000506690 FAM187AA6NFU0 413 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 KRT16P08779 473 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 COPS2P61201 443 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 CNGA2Q16280 664 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 C12orf60Q5U649 245 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 DCAF12L1Q5VU92 463 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 REXO1Q8N1G1 1221 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 SH3GL3Q99963 347 aa18.54■□□□□ 0.56
SQSTM1-211ENST00000506690 CPVLQ9H3G5 476 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms