RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 WDR48Q8TAF3 677 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 EMC7Q9NPA0 242 aa7.88□□□□□ -1.15
NIPBL-205ENST00000505998 A0A1B0GTL3 188 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 MPIG6BO95866 241 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 IL18BPO95998 194 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 ID4P47928 161 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 MLLT6P55198 1093 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-205ENST00000505998 TRMT10BQ6PF06 316 aaKnown RBP7.87□□□□□ -1.15
NIPBL-205ENST00000505998 RTN4RL1Q86UN2 441 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-205ENST00000505998 CALML6Q8TD86 181 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 C16orf92Q96LL3 132 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 AMNQ9BXJ7 453 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 GOLGA2P5Q9HBQ8 144 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 KCND1Q9NSA2 647 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 APOBEC2Q9Y235 224 aaKnown RBP7.87□□□□□ -1.15
NIPBL-205ENST00000505998 TARBP1Q13395 1621 aaKnown RBP7.87□□□□□ -1.15
NIPBL-205ENST00000505998 ERCC6Q03468 1493 aa7.87□□□□□ -1.15
NIPBL-205ENST00000505998 UBA6A0AVT1 1052 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-205ENST00000505998 DDX3XO00571 662 aaKnown RBP eCLIP7.86□□□□□ -1.15
NIPBL-205ENST00000505998 TGM5O43548 720 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 CHGBP05060 677 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 CD40P25942 277 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 IL13P35225 146 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 ECE1P42892 770 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 ADCY1Q08828 1119 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 ESRP1Q6NXG1 681 aaKnown RBP7.86□□□□□ -1.15
NIPBL-205ENST00000505998 LRSAM1Q6UWE0 723 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 C1QL4Q86Z23 238 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 CARFQ8N187 725 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 ATL2Q8NHH9 583 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 ZCRB1Q8TBF4 217 aaKnown RBP7.86□□□□□ -1.15
NIPBL-205ENST00000505998 FOXRED1Q96CU9 486 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-205ENST00000505998 BTBD2Q9BX70 525 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 KRTAP4-8Q9BYQ9 185 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 ZMAT4Q9H898 229 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 L2HGDHQ9H9P8 463 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 MCM8Q9UJA3 840 aa7.86□□□□□ -1.15
NIPBL-205ENST00000505998 WRNQ14191 1432 aaPredicted RBP eCLIP7.86□□□□□ -1.15
NIPBL-205ENST00000505998 EYA4O95677 639 aa7.85□□□□□ -1.15
NIPBL-205ENST00000505998 ZNF28P17035 718 aa7.85□□□□□ -1.15
NIPBL-205ENST00000505998 LSP1P33241 339 aa7.85□□□□□ -1.15
NIPBL-205ENST00000505998 SMAD3P84022 425 aaKnown RBP7.85□□□□□ -1.15
NIPBL-205ENST00000505998 ALDH6A1Q02252 535 aaKnown RBP7.85□□□□□ -1.15
NIPBL-205ENST00000505998 TTC38Q5R3I4 469 aa7.85□□□□□ -1.15
NIPBL-205ENST00000505998 TP53I13Q8NBR0 393 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-205ENST00000505998 FOXB1Q99853 325 aa7.85□□□□□ -1.15
NIPBL-205ENST00000505998 FAM126AQ9BYI3 521 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-205ENST00000505998 FTSJ1Q9UET6 329 aa7.85□□□□□ -1.15
NIPBL-205ENST00000505998 COL4A3BPQ9Y5P4 624 aa7.85□□□□□ -1.15
NIPBL-205ENST00000505998 POLA1P09884 1462 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-205ENST00000505998 PHC1P78364 1004 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 SLC6A3Q01959 620 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 ROM1Q03395 351 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 LRRC32Q14392 662 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 STAT4Q14765 748 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 DDB1Q16531 1140 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 WDR72Q3MJ13 1102 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 GPR158Q5T848 1215 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 C7orf31Q8N865 590 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 WDR66Q8TBY9 1149 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 ZCCHC14Q8WYQ9 949 aaKnown RBP7.84□□□□□ -1.15
NIPBL-205ENST00000505998 RTF1Q92541 710 aaKnown RBP7.84□□□□□ -1.15
NIPBL-205ENST00000505998 SLC5A5Q92911 643 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 MAML3Q96JK9 1138 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 TUBGCP5Q96RT8 1024 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 OR10A5Q9H207 317 aa7.84□□□□□ -1.15
NIPBL-205ENST00000505998 H0Y858 1186 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 RAB11FIP3O75154 756 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 ULK1O75385 1050 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 KNG1P01042 644 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 PRLP01236 227 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 CYP1A1P04798 512 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-205ENST00000505998 ZSCAN22P10073 491 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-205ENST00000505998 COL6A1P12109 1028 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 POU3F3P20264 500 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-205ENST00000505998 IBSPP21815 317 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-205ENST00000505998 SLURP1P55000 103 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 IL13RA1P78552 427 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 TERF2Q15554 542 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 PTPROQ16827 1216 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 BROXQ5VW32 411 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 MCTP2Q6DN12 878 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 HDGFL2Q7Z4V5 671 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-205ENST00000505998 PHYKPLQ8IUZ5 450 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 ZNF610Q8N9Z0 462 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 ADAMTS17Q8TE56 1095 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 SPATA25Q9BR10 227 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 ATP8A1Q9Y2Q0 1164 aa7.83□□□□□ -1.16
NIPBL-205ENST00000505998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-205ENST00000505998 NCLP19338 710 aaKnown RBP7.82□□□□□ -1.16
NIPBL-205ENST00000505998 APEX1P27695 318 aaKnown RBP7.82□□□□□ -1.16
NIPBL-205ENST00000505998 TMPRSS15P98073 1019 aa7.82□□□□□ -1.16
NIPBL-205ENST00000505998 AMPD3Q01432 767 aa7.82□□□□□ -1.16
NIPBL-205ENST00000505998 STILQ15468 1287 aa7.82□□□□□ -1.16
NIPBL-205ENST00000505998 PRAMEF9Q5VWM5 478 aa7.82□□□□□ -1.16
NIPBL-205ENST00000505998 SLFN12LQ6IEE8 588 aa7.82□□□□□ -1.16
NIPBL-205ENST00000505998 TIGD7Q6NT04 549 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-205ENST00000505998 CXXC5Q7LFL8 322 aaKnown RBP7.82□□□□□ -1.16
NIPBL-205ENST00000505998 DDX42Q86XP3 938 aaKnown RBP eCLIP7.82□□□□□ -1.16
NIPBL-205ENST00000505998 PCDH12Q9NPG4 1184 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms