RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 VSIG10LQ86VR7 867 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 DEF6Q9H4E7 631 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 ST6GALNAC4Q9H4F1 302 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 ADARB2Q9NS39 739 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 ZNF214Q9UL59 606 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 SERPING1P05155 500 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 EIF2AK2P19525 551 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 HMGCS2P54868 508 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 HERVK_113P62684 666 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 ITGB3BPQ13352 177 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 ODR4Q5SWX8 454 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 CCDC122Q5T0U0 273 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 SFMBT2Q5VUG0 894 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 SNRNP48Q6IEG0 339 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 PADI6Q6TGC4 694 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 NSMFQ6X4W1 530 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 RRAGAQ7L523 313 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 SMAP1Q8IYB5 467 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 DRC1Q96MC2 740 aa18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 CCDC43Q96MW1 224 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 LSM14BQ9BX40 385 aaKnown RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 ARGLU1Q9NWB6 273 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC11-204ENST00000505676 NFASCO94856 1347 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 ANO9A1A5B4 782 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 LRRC53A6NM62 1247 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 SLC35F6Q8N357 371 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 CHST13Q8NET6 341 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 INPP4AQ96PE3 977 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 FIZ1Q96SL8 496 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 GBP3Q9H0R5 595 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 SPON1Q9HCB6 807 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 BZW2Q9Y6E2 419 aaKnown RBP18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 SSC5DA1L4H1 1573 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 BAATQ14032 418 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 PPP2R5AQ15172 486 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 BANK1Q8NDB2 785 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 PURBQ96QR8 312 aaKnown RBP18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 CARD6Q9BX69 1037 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 SAMM50Q9Y512 469 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 RLFQ13129 1914 aa18.97■□□□□ 0.63
TRAPPC11-204ENST00000505676 POTEB2H3BUK9 544 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 ABCD1P33897 745 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 RARRES1P49788 294 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 KIF11P52732 1056 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 C12orf56Q8IXR9 622 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 GOLGA1Q92805 767 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 HVCN1Q96D96 273 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 AIPL1Q9NZN9 384 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 WRAP73Q9P2S5 460 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 FBXO40Q9UH90 709 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 FRMD4BQ9Y2L6 1034 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 ATP8B3O60423 1300 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 RBAK-RBAKDNI3L0D1 243 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 TGFB1I1O43294 461 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 HIP1RO75146 1068 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 PPP1R37O75864 691 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 NR3C2P08235 984 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 MYCLP12524 364 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 ELF2Q15723 593 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 GNPTABQ3T906 1256 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 GBP6Q6ZN66 633 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 GPR161Q8N6U8 529 aaKnown RBP18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 SMCR8Q8TEV9 937 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 RABGGTAQ92696 567 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 ARHGAP20Q9P2F6 1191 aa18.96■□□□□ 0.63
TRAPPC11-204ENST00000505676 ZMYM2Q9UBW7 1377 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 NKRFO15226 690 aaKnown RBP eCLIP18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 AKR1B10O60218 316 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 AKAP3O75969 853 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 SRGAP1Q7Z6B7 1085 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 DNERQ8NFT8 737 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 C17orf75Q9HAS0 396 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 DMAC2Q9NW81 257 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 KCNG1Q9UIX4 513 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 GUCA1BQ9UMX6 200 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 LOC285556D6RIA3 1793 aa18.95■□□□□ 0.62
TRAPPC11-204ENST00000505676 DDX39AO00148 427 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 EPHB6O15197 1021 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 NOL4O94818 638 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 TUBBP07437 444 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 PLS3P13797 630 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 YWHABP31946 246 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 HIRAP54198 1017 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 MAPK7Q13164 816 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 EXOC3L4Q17RC7 722 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 C10orf76Q5T2E6 689 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 OTUD6AQ7L8S5 288 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 FAM186BQ8IYM0 893 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 TRIM58Q8NG06 486 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 ATP6V0A1Q93050 837 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 DCPSQ96C86 337 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 IFIH1Q9BYX4 1025 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 GANQ9H2C0 597 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 MAPK13O15264 365 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 PJA2O43164 708 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 SCP2P22307 547 aa18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 NMT1P30419 496 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-204ENST00000505676 DGKZQ13574 1117 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms