RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 TMOD4Q9NZQ9 345 aa7.57□□□□□ -1.2
SSBP2-204ENST00000504985 PCDHGC5Q9Y5F6 944 aa7.57□□□□□ -1.2
SSBP2-204ENST00000504985 MROH5Q6ZUA9 1318 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 H3BRB1 525 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 PDLIM1O00151 329 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 FGFR2P21802 821 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 SLC8A1P32418 973 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 GJA8P48165 433 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 RAB27AP51159 221 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 RRP12Q5JTH9 1297 aaKnown RBP7.56□□□□□ -1.2
SSBP2-204ENST00000504985 SPATA21Q7Z572 469 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 AMOTL1Q8IY63 956 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 DRC7Q8IY82 874 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 CNTROBQ8N137 903 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 GBP7Q8N8V2 638 aaPredicted RBP7.56□□□□□ -1.2
SSBP2-204ENST00000504985 PRPF38AQ8NAV1 312 aaKnown RBP7.56□□□□□ -1.2
SSBP2-204ENST00000504985 FAM81AQ8TBF8 368 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 NUP133Q8WUM0 1156 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 CCDC74AQ96AQ1 378 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 EDC3Q96F86 508 aaKnown RBP7.56□□□□□ -1.2
SSBP2-204ENST00000504985 EHD4Q9H223 541 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 TUT1Q9H6E5 874 aaKnown RBP7.56□□□□□ -1.2
SSBP2-204ENST00000504985 SPON1Q9HCB6 807 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 CRIM1Q9NZV1 1036 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 SWAP70Q9UH65 585 aa7.56□□□□□ -1.2
SSBP2-204ENST00000504985 AKAP11Q9UKA4 1901 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 LTBP1Q14766 1721 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 ATXN2Q99700 1313 aaKnown RBP7.55□□□□□ -1.2
SSBP2-204ENST00000504985 TMEM238LA0A1B0GVL6 79 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 EFCAB8A8MWE9 144 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 GPR182O15218 404 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 TMPRSS2O15393 492 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 ZSCAN9O15535 394 aaPredicted RBP7.55□□□□□ -1.2
SSBP2-204ENST00000504985 CEP104O60308 925 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 PDE8BO95263 885 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 SERPINB2P05120 415 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 RAB6AP20340 208 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 ARHGAP25P42331 645 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 FAAP100Q0VG06 881 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 LAMB3Q13751 1172 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 PUM3Q15397 648 aaKnown RBP7.55□□□□□ -1.2
SSBP2-204ENST00000504985 ARHGAP29Q52LW3 1261 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 B4GALNT4Q76KP1 1039 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 GLYCTKQ8IVS8 523 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 MYOCDQ8IZQ8 938 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 MAB21L3Q8N8X9 362 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 FLAD1Q8NFF5 587 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 CELF1Q92879 486 aaKnown RBP7.55□□□□□ -1.2
SSBP2-204ENST00000504985 ALKBH8Q96BT7 664 aaKnown RBP7.55□□□□□ -1.2
SSBP2-204ENST00000504985 CCDC114Q96M63 670 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 NEUROD6Q96NK8 337 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 RUFY1Q96T51 708 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 CDC5LQ99459 802 aaKnown RBP7.55□□□□□ -1.2
SSBP2-204ENST00000504985 HAUS7Q99871 368 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 BOLA2Q9H3K6 86 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 L2HGDHQ9H9P8 463 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 KIF9Q9HAQ2 790 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 TRPV5Q9NQA5 729 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 RAD18Q9NS91 495 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 DOCK2Q92608 1830 aa7.55□□□□□ -1.2
SSBP2-204ENST00000504985 RFX7Q2KHR2 1363 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 SNAP23O00161 211 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 EIF1AYO14602 144 aaKnown RBP7.54□□□□□ -1.2
SSBP2-204ENST00000504985 NDUFB5O43674 189 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 KIAA0754O94854 1291 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 CAVIN2O95810 425 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 FESP07332 822 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 JUNBP17275 347 aaPredicted RBP7.54□□□□□ -1.2
SSBP2-204ENST00000504985 NAT1P18440 290 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 IGHMBP2P38935 993 aaKnown RBP7.54□□□□□ -1.2
SSBP2-204ENST00000504985 PSMD7P51665 324 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 CHRNDQ07001 517 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 BRD3Q15059 726 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 SLC15A2Q16348 729 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 CRY2Q49AN0 593 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 CCDC92Q53HC0 331 aaPredicted RBP7.54□□□□□ -1.2
SSBP2-204ENST00000504985 C16orf87Q6PH81 154 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 OTUD6AQ7L8S5 288 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 ARHGAP22Q7Z5H3 698 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 RNF168Q8IYW5 571 aaPredicted RBP7.54□□□□□ -1.2
SSBP2-204ENST00000504985 C3orf20Q8ND61 904 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 AGBL5Q8NDL9 886 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 FAM76AQ8TAV0 307 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 BCL7CQ8WUZ0 217 aaPredicted RBP7.54□□□□□ -1.2
SSBP2-204ENST00000504985 LZICQ8WZA0 190 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 JAKMIP2Q96AA8 810 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 EVI5LQ96CN4 794 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 WDR89Q96FK6 387 aaPredicted RBP7.54□□□□□ -1.2
SSBP2-204ENST00000504985 MPHOSPH8Q99549 860 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 WDR37Q9Y2I8 494 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 ATP8A1Q9Y2Q0 1164 aa7.54□□□□□ -1.2
SSBP2-204ENST00000504985 MYH7P12883 1935 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 KLRG2A4D1S0 409 aaPredicted RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 WTIPA6NIX2 430 aaPredicted RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 TAF5LO75529 589 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 GBP2P32456 591 aaPredicted RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 PHKA1P46020 1223 aa7.53□□□□□ -1.2
SSBP2-204ENST00000504985 GCLCP48506 637 aaPredicted RBP7.53□□□□□ -1.2
SSBP2-204ENST00000504985 MCM2P49736 904 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms