RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 NPEPPSP55786 919 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 PRKCZQ05513 592 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 TTLL4Q14679 1199 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 TARBP2Q15633 366 aaKnown RBP11.56□□□□□ -0.56
TPM3-217ENST00000504663 CT47A1Q5JQC4 288 aaPredicted RBP11.56□□□□□ -0.56
TPM3-217ENST00000504663 MIS18BP1Q6P0N0 1132 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 EPM2AIP1Q7L775 607 aaPredicted RBP11.56□□□□□ -0.56
TPM3-217ENST00000504663 TRIM50Q86XT4 487 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 ENOX1Q8TC92 643 aaKnown RBP11.56□□□□□ -0.56
TPM3-217ENST00000504663 TRIB2Q92519 343 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 SH2D3AQ9BRG2 576 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 STRA6Q9BX79 667 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 LRRC27Q9C0I9 530 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 ABHD16BQ9H3Z7 469 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 POLD4Q9HCU8 107 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 SAMM50Q9Y512 469 aa11.56□□□□□ -0.56
TPM3-217ENST00000504663 ZMYM2Q9UBW7 1377 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 PPP1R37O75864 691 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 OATP04181 439 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 CYP2C19P33261 490 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 TCF7P36402 384 aaPredicted RBP11.55□□□□□ -0.56
TPM3-217ENST00000504663 PSMC4P43686 418 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 FCGRTP55899 365 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 MYL5Q02045 173 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 DUSP28Q4G0W2 176 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 ZCWPW2Q504Y3 356 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 FAM26FQ5R3K3 315 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 PRAMEF19Q5SWL8 479 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 UTP14CQ5TAP6 766 aaKnown RBP11.55□□□□□ -0.56
TPM3-217ENST00000504663 TTI2Q6NXR4 508 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 APTXQ7Z2E3 356 aaKnown RBP11.55□□□□□ -0.56
TPM3-217ENST00000504663 SFR1Q86XK3 245 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 SEPT1Q8WYJ6 367 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
TPM3-217ENST00000504663 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 PDLIM2Q96JY6 352 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 DUSP9Q99956 384 aaKnown RBP11.55□□□□□ -0.56
TPM3-217ENST00000504663 SLC39A2Q9NP94 309 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 ZNF302Q9NR11 478 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 EXOC1Q9NV70 894 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 PANK4Q9NVE7 773 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 KCND2Q9NZV8 630 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 CTNND2Q9UQB3 1225 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 SYNRGQ9UMZ2 1314 aa11.55□□□□□ -0.56
TPM3-217ENST00000504663 ARHGEF35A5YM69 484 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 TRIM49BA6NDI0 452 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 HIP1RO75146 1068 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 TRPA1O75762 1119 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 GH1P01241 217 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 MMP3P08254 477 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 XRCC5P13010 732 aaKnown RBP11.54□□□□□ -0.56
TPM3-217ENST00000504663 CYBAP13498 195 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 DEKP35659 375 aaKnown RBP11.54□□□□□ -0.56
TPM3-217ENST00000504663 IRX5P78411 483 aaPredicted RBP11.54□□□□□ -0.56
TPM3-217ENST00000504663 SP3Q02447 781 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 TRIM32Q13049 653 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 BMT2Q1RMZ1 405 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 CCDC144BQ3MJ40 725 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 XKR3Q5GH77 459 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 L1TD1Q5T7N2 865 aaKnown RBP11.54□□□□□ -0.56
TPM3-217ENST00000504663 CDKAL1Q5VV42 579 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 SARM1Q6SZW1 724 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 IRF2BP1Q8IU81 584 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 DHX37Q8IY37 1157 aaKnown RBP11.54□□□□□ -0.56
TPM3-217ENST00000504663 PPTC7Q8NI37 304 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 SCFD1Q8WVM8 642 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 ATP6V0A1Q93050 837 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 SPATA33Q96N06 139 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 NIFKQ9BYG3 293 aaKnown RBP11.54□□□□□ -0.56
TPM3-217ENST00000504663 SEMA6BQ9H3T3 888 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 OLFML3Q9NRN5 406 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 RWDD2AQ9UIY3 292 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 ZHX1Q9UKY1 873 aaPredicted RBP11.54□□□□□ -0.56
TPM3-217ENST00000504663 ODF2LQ9ULJ1 636 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 MAPK8IP1Q9UQF2 711 aa11.54□□□□□ -0.56
TPM3-217ENST00000504663 PCNTO95613 3336 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 USO1O60763 962 aaKnown RBP11.53□□□□□ -0.56
TPM3-217ENST00000504663 ZMYND10O75800 440 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 MYBP10242 640 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 ATP1A3P13637 1013 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 IDEP14735 1019 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 FLT3LGP49771 235 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 STX17P56962 302 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 PAK1Q13153 545 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 PSMD2Q13200 908 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 LRRC41Q15345 812 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 FOXR2Q6PJQ5 311 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 CCDC65Q8IXS2 484 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 ZC3H3Q8IXZ2 948 aaKnown RBP11.53□□□□□ -0.56
TPM3-217ENST00000504663 GUF1Q8N442 669 aaKnown RBP11.53□□□□□ -0.56
TPM3-217ENST00000504663 CD99L2Q8TCZ2 262 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 AFG1LQ8WV93 481 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 NELFBQ8WX92 580 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 BSNDQ8WZ55 320 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 C16orf70Q9BSU1 422 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 KCTD10Q9H3F6 313 aa11.53□□□□□ -0.56
TPM3-217ENST00000504663 DHX33Q9H6R0 707 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms