RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 FBXO18Q8NFZ0 1043 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 CELF4Q9BZC1 486 aaKnown RBP23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 FOXP1Q9H334 677 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 VAV3Q9UKW4 847 aa23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 MYH9P35579 1960 aaKnown RBP23.83■■□□□ 1.41
TRAPPC11-203ENST00000504526 GJB5O95377 273 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 MYOGP15173 224 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 GUCY1B3Q02153 619 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 UGCGQ16739 394 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 XKR3Q5GH77 459 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 POTEDQ86YR6 584 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 KIAA0319LQ8IZA0 1049 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 HAS1Q92839 578 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 OSBPL7Q9BZF2 842 aa23.82■■□□□ 1.4
TRAPPC11-203ENST00000504526 CA3P07451 260 aa23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 TMOD1P28289 359 aa23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 PSMC5P62195 406 aa23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 MYOCDQ8IZQ8 938 aa23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 ZNF710Q8N1W2 664 aa23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 MYLIPQ8WY64 445 aa23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 RAD9AQ99638 391 aa23.81■■□□□ 1.4
TRAPPC11-203ENST00000504526 NEMFO60524 1076 aa23.8■■□□□ 1.4
TRAPPC11-203ENST00000504526 FOSL2P15408 326 aa23.8■■□□□ 1.4
TRAPPC11-203ENST00000504526 GBF1Q92538 1859 aa23.8■■□□□ 1.4
TRAPPC11-203ENST00000504526 TMX3Q96JJ7 454 aa23.8■■□□□ 1.4
TRAPPC11-203ENST00000504526 GAS2L1Q99501 681 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC11-203ENST00000504526 NIFKQ9BYG3 293 aaKnown RBP23.8■■□□□ 1.4
TRAPPC11-203ENST00000504526 EML1O00423 815 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 P4HBP07237 508 aaKnown RBP23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 QARSP47897 775 aaKnown RBP23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 TMEM62Q0P6H9 643 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 GNL2Q13823 731 aaKnown RBP23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 EPHA7Q15375 998 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 CALCRLQ16602 461 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 ODR4Q5SWX8 454 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 METTL13Q8N6R0 699 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 MAP7D2Q96T17 732 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 FTHL17Q9BXU8 183 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 BACH2Q9BYV9 841 aa23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 SEPT9Q9UHD8 586 aaPredicted RBP23.79■■□□□ 1.4
TRAPPC11-203ENST00000504526 MICAL3Q7RTP6 2002 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 TBC1D8BQ0IIM8 1120 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 ORC2Q13416 577 aaPredicted RBP23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 TARBP2Q15633 366 aaKnown RBP23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 EFCAB12Q6NXP0 572 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 BANK1Q8NDB2 785 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 TOP1MTQ969P6 601 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 PRDM12Q9H4Q4 367 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 AGO3Q9H9G7 860 aaKnown RBP23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 PCDHA12Q9UN75 941 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 INSL6Q9Y581 213 aa23.78■■□□□ 1.4
TRAPPC11-203ENST00000504526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 CD52P31358 61 aa23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 TAP1Q03518 808 aa23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 PAK2Q13177 524 aa23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 NCAPH2Q6IBW4 605 aa23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 TMCO2Q7Z6W1 182 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 LINC01465Q8N7H1 131 aa23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 SIP14410 1827 aa23.77■■□□□ 1.4
TRAPPC11-203ENST00000504526 STBD1O95210 358 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 TRAPPC10P48553 1259 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 CRYBB1P53674 252 aaPredicted RBP23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 SPIRE1Q08AE8 756 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 NOSTRINQ8IVI9 506 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 JPH2Q9BR39 696 aaPredicted RBP23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 PADI3Q9ULW8 664 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 NOL7Q9UMY1 257 aaKnown RBP23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 GINS2Q9Y248 185 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 PPME1Q9Y570 386 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 PTPRSQ13332 1948 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 WDR81Q562E7 1941 aa23.76■■□□□ 1.39
TRAPPC11-203ENST00000504526 DDX11L8A8MPP1 907 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 CD2BP2O95400 341 aaKnown RBP23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 CLCN3P51790 818 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 HTRA4P83105 476 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 MTERF2Q49AM1 385 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 FAM117BQ6P1L5 589 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 C4orf19Q8IY42 314 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 EXOC8Q8IYI6 725 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 NEK9Q8TD19 979 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 MTMR9Q96QG7 549 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 TTC12Q9H892 705 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 AKT3Q9Y243 479 aa23.75■■□□□ 1.39
TRAPPC11-203ENST00000504526 ENPP3O14638 875 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 RPS6KA5O75582 802 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 VTNP04004 478 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 ATP2B1P20020 1258 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 U2AF2P26368 475 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 DNM2P50570 870 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 CDC42EP1Q00587 391 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 KIZQ2M2Z5 673 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 LRRC71Q8N4P6 559 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 MAFAQ8NHW3 353 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 ZSWIM4Q9H7M6 989 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 SUGCTQ9HAC7 445 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 GTF3C3Q9Y5Q9 886 aa23.74■■□□□ 1.39
TRAPPC11-203ENST00000504526 IGKV6-21A0A0C4DH24 114 aa23.73■■□□□ 1.39
TRAPPC11-203ENST00000504526 WNT7AO00755 349 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms