RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 KIF5AQ12840 1032 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 SLC9C1Q4G0N8 1177 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 ZNF569Q5MCW4 686 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 PADI6Q6TGC4 694 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL1A1-210ENST00000504289 KIAA1328Q86T90 577 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 NELFCDQ8IXH7 590 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 FAM178BQ8IXR5 827 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 GPR161Q8N6U8 529 aaKnown RBP10.77□□□□□ -0.69
COL1A1-210ENST00000504289 ACRBPQ8NEB7 543 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 DNERQ8NFT8 737 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 PIGOQ8TEQ8 1089 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 RABGGTAQ92696 567 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 KCNN1Q92952 543 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 ATG4CQ96DT6 458 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 RPGRIP1Q96KN7 1286 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 DRC1Q96MC2 740 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 TAAR1Q96RJ0 339 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 FIZ1Q96SL8 496 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 GBP3Q9H0R5 595 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 ACAD9Q9H845 621 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 FAM207AQ9NSI2 230 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-210ENST00000504289 ARGLU1Q9NWB6 273 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-210ENST00000504289 GGA3Q9NZ52 723 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 TBC1D7Q9P0N9 293 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 REXO2Q9Y3B8 237 aaKnown RBP10.77□□□□□ -0.69
COL1A1-210ENST00000504289 RLFQ13129 1914 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 ASTN2O75129 1339 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-210ENST00000504289 PHIPQ8WWQ0 1821 aa10.77□□□□□ -0.69
COL1A1-210ENST00000504289 PMM2O15305 246 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 CHMP2AO43633 222 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 PRPF6O94906 941 aaKnown RBP10.76□□□□□ -0.69
COL1A1-210ENST00000504289 NR3C2P08235 984 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 MYBP10242 640 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 RFX1P22670 979 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 COPB2P35606 906 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 CASP5P51878 434 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 HERVK_113P62684 666 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 UBXN2AP68543 259 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
COL1A1-210ENST00000504289 ITGB3BPQ13352 177 aaPredicted RBP10.76□□□□□ -0.69
COL1A1-210ENST00000504289 GNPTABQ3T906 1256 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 ODR4Q5SWX8 454 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 CCDC122Q5T0U0 273 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 SFMBT2Q5VUG0 894 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 SNRNP48Q6IEG0 339 aaKnown RBP10.76□□□□□ -0.69
COL1A1-210ENST00000504289 LBX2Q6XYB7 198 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 GBP6Q6ZN66 633 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 RRAGAQ7L523 313 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 OTUD6AQ7L8S5 288 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 SRGAP1Q7Z6B7 1085 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 RNF10Q8N5U6 811 aaKnown RBP10.76□□□□□ -0.69
COL1A1-210ENST00000504289 TRIM58Q8NG06 486 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 IL31RAQ8NI17 732 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 TRPM4Q8TD43 1214 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 ZC3H15Q8WU90 426 aaKnown RBP10.76□□□□□ -0.69
COL1A1-210ENST00000504289 ATP6V0A1Q93050 837 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 ZKSCAN4Q969J2 545 aaPredicted RBP10.76□□□□□ -0.69
COL1A1-210ENST00000504289 JAKMIP2Q96AA8 810 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 EEF2KMTQ96G04 330 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 BORCS6Q96GS4 357 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 FGFBP2Q9BYJ0 223 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 FRMD4BQ9Y2L6 1034 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 PCDHA10Q9Y5I2 948 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 ASTN1O14525 1302 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 PFASO15067 1338 aa10.76□□□□□ -0.69
COL1A1-210ENST00000504289 UNCXA6NJT0 531 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 RSPH10B2B2RC85 870 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 H0YCG3 227 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 FANCGO15287 622 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 P4HA2O15460 535 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 TGFB1I1O43294 461 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 ATP8B1O43520 1251 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 AKR1B10O60218 316 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 USP2O75604 605 aaPredicted RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 NOL4O94818 638 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 RSPH10BP0C881 870 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 PLS3P13797 630 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 PRLRP16471 622 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 EIF2AK2P19525 551 aaKnown RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 ICAM3P32942 547 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 RARRES1P49788 294 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 KLK7P49862 253 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 KIF11P52732 1056 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 HIRAP54198 1017 aaPredicted RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 HMGCS2P54868 508 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 RTP1P59025 263 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 RBM10P98175 930 aaKnown RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 RAD51AP2Q09MP3 1159 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 MAPK7Q13164 816 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 BAATQ14032 418 aaPredicted RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 EXOC3L4Q17RC7 722 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 ASTE1Q2TB18 679 aaPredicted RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 PAPD7Q5XG87 772 aaKnown RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 NSMFQ6X4W1 530 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 SLC30A10Q6XR72 485 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 RSRC2Q7L4I2 434 aaKnown RBP10.75□□□□□ -0.69
COL1A1-210ENST00000504289 SLC35F6Q8N357 371 aa10.75□□□□□ -0.69
COL1A1-210ENST00000504289 CCDC155Q8N6L0 562 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms