RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 GJD3Q8N144 294 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 TRAPPC12Q8WVT3 735 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
MED28-203ENST00000503945 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 FTHL17Q9BXU8 183 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 NRBP2Q9NSY0 501 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
MED28-203ENST00000503945 GRXCR2A6NFK2 248 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 CDKL5O76039 1030 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 XBP1P17861 261 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 GPM6BQ13491 265 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 PTPROQ16827 1216 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 PTCRAQ6ISU1 281 aaPredicted RBP13.53□□□□□ -0.24
MED28-203ENST00000503945 TMEM192Q8IY95 271 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 FAM177A1Q8N128 213 aaPredicted RBP13.53□□□□□ -0.24
MED28-203ENST00000503945 FIBCD1Q8N539 461 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 MRPL38Q96DV4 380 aaKnown RBP13.53□□□□□ -0.24
MED28-203ENST00000503945 RIT2Q99578 217 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
MED28-203ENST00000503945 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 GINS2Q9Y248 185 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
MED28-203ENST00000503945 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
MED28-203ENST00000503945 H3BNC9 293 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 MAGEB2O15479 319 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 CD52P31358 61 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 NFX1Q12986 1120 aaKnown RBP13.52□□□□□ -0.25
MED28-203ENST00000503945 PAK2Q13177 524 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 ANKRD1Q15327 319 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 ODR4Q5SWX8 454 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 CCDC60Q8IWA6 550 aaPredicted RBP13.52□□□□□ -0.25
MED28-203ENST00000503945 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 BLIDQ8IZY5 108 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 METTL13Q8N6R0 699 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 NEK9Q8TD19 979 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 TBCKQ8TEA7 893 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 AGO3Q9H9G7 860 aaKnown RBP13.52□□□□□ -0.25
MED28-203ENST00000503945 DISC1Q9NRI5 854 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
MED28-203ENST00000503945 ATG2AQ2TAZ0 1938 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 COL1A2P08123 1366 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 WDR64B1ANS9 1081 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 H3BQ06 376 aaPredicted RBP13.51□□□□□ -0.25
MED28-203ENST00000503945 MSH4O15457 936 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 GAS7O60861 476 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 RB1P06400 928 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 STAG3L1P0CL83 205 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 ATP4AP20648 1035 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 TMOD1P28289 359 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 SFNP31947 248 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 SSTR3P32745 418 aaPredicted RBP13.51□□□□□ -0.25
MED28-203ENST00000503945 ANAPC15P60006 121 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 TCEAL5Q5H9L2 206 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 RTN4RL1Q86UN2 441 aaPredicted RBP13.51□□□□□ -0.25
MED28-203ENST00000503945 BANK1Q8NDB2 785 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 FAM167AQ96KS9 214 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
MED28-203ENST00000503945 RWDD3Q9Y3V2 267 aa13.51□□□□□ -0.25
MED28-203ENST00000503945 RALGAPA2Q2PPJ7 1873 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 IGSF9BQ9UPX0 1349 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 CYP3A7-CYP3A51PA0A087WV96 503 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 GPR182O15218 404 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 RPS6KA5O75582 802 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 CYP3A7P24462 503 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 BMPR1AP36894 532 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
MED28-203ENST00000503945 Q4G0T1 1027 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 LRCH2Q5VUJ6 765 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 SLC5A5Q92911 643 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 LENG9Q96B70 501 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 TEKT3Q9BXF9 490 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 LRFN2Q9ULH4 789 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 PCDHB7Q9Y5E2 793 aa13.5□□□□□ -0.25
MED28-203ENST00000503945 EDIL3O43854 480 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 PFKFB2O60825 505 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 DGKIO75912 1065 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 JAK3P52333 1124 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 CRYBB1P53674 252 aaPredicted RBP13.49□□□□□ -0.25
MED28-203ENST00000503945 SCRN1Q12765 414 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
MED28-203ENST00000503945 PUS10Q3MIT2 529 aaKnown RBP13.49□□□□□ -0.25
MED28-203ENST00000503945 EFCAB12Q6NXP0 572 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 EP400NLQ6ZTU2 488 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 KRT25Q7Z3Z0 450 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 WASF1Q92558 559 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 CDHR5Q9HBB8 845 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
MED28-203ENST00000503945 CCDC194A0A1B0GVG4 234 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 DENND3A2RUS2 1198 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 PRR33A8MZF0 331 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 M0R2N6 131 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 CHMP2AO43633 222 aa13.48□□□□□ -0.25
MED28-203ENST00000503945 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
MED28-203ENST00000503945 ALADP13716 330 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms